KEGG   Rattus norvegicus (rat): 29629
Entry
29629             CDS       T01003                                 

Gene name
Gria4, GluA4, GluR-D, GluR4
Definition
(RefSeq) glutamate ionotropic receptor AMPA type subunit 4
  KO
K05200  glutamate receptor 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04024  cAMP signaling pathway
rno04080  Neuroactive ligand-receptor interaction
rno04713  Circadian entrainment
rno04723  Retrograde endocannabinoid signaling
rno04724  Glutamatergic synapse
rno04728  Dopaminergic synapse
rno05016  Huntington disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05031  Amphetamine addiction
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    29629 (Gria4)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    29629 (Gria4)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    29629 (Gria4)
   04728 Dopaminergic synapse
    29629 (Gria4)
   04723 Retrograde endocannabinoid signaling
    29629 (Gria4)
  09159 Environmental adaptation
   04713 Circadian entrainment
    29629 (Gria4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    29629 (Gria4)
   05022 Pathways of neurodegeneration - multiple diseases
    29629 (Gria4)
  09165 Substance dependence
   05031 Amphetamine addiction
    29629 (Gria4)
   05033 Nicotine addiction
    29629 (Gria4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    29629 (Gria4)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   29629 (Gria4)
SSDB
Motif
Pfam: ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3 Peripla_BP_6 DUF2061
Other DBs
NCBI-GeneID: 29629
NCBI-ProteinID: NP_001106655
RGD: 61863
Ensembl: ENSRNOG00000006957
UniProt: P19493 G3V6W1 Q566D4
Structure
PDB: 

Position
8q11
AA seq 902 aa
MRIICRQIVLLFSGFWGLAMGAFPSSVQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEA
PFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITP
SFPTEGESQFVLQLRPSLRGALLSLLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWH
VSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIA
NLGFKDISLERFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGSETPPKYTSAL
TYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGN
VQFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTAAIENRTVVVT
TIMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK
IWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFL
DPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLW
FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED
LAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKG
KFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGL
LDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKS
RAEAKRMKLTFSEAIRNKARLSITGSVGENGRVLTPDCPKAVHTGTAIRQSSGLAVIASD
LP
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgaggattatttgcaggcagattgtcttgttgttttctggattttggggactcgccatg
ggagcctttccaagcagcgttcaaataggtggtctcttcatccgaaacacagaccaggaa
tacactgcttttagactggcaatctttcttcataacaccagccccaatgcatcggaagct
cctttcaatttggtacctcatgtggacaacattgagactgccaacagttttgctgtgaca
aacgccttctgttcccagtattctagaggggtgtttgccatttttggactctatgacaag
agatccgtgcataccttgacctcgttctgcagtgctctgcacatctctctcatcacacca
agctttcccactgaaggggagagccagtttgtgctgcagctaagaccttcactgagaggt
gcactcctgagcctcctggatcactatgagtggaactgtttcgtcttcctgtatgataca
gacagggggtattcaatacttcaagctataatggaaaaagcaggacaaaatggatggcat
gtcagtgcaatatgtgtggaaaattttaatgatgtcagctacaggcaactgctagaagag
cttgacagaagacaagagaagaaatttgtgatagattgtgagatagagaggcttcaaaac
attttagaacaaattgtgagtgttgggaagcatgtcaaaggctaccattatatcatcgca
aatttgggtttcaaggatatttctcttgagagatttatacatggaggagcaaatgtaaca
ggattccagttggtagattttaatacacccatggtaaccaaactaatggatcggtggaag
aaactagatcagagagaatatccaggttctgaaacacctccaaagtacacctctgctctc
acttatgatggagtcctggtgatggctgaaactttccgaagtctcagaagacagaaaatt
gatatttcaaggagaggaaatgctggggactgtctggcaaaccctgctgctccctggggc
cagggaattgacatggagaggacactgaagcaggttcgaattcaagggctgactgggaat
gttcaatttgaccattatggacgtagagttaattacacaatggatgtgtttgaactgaaa
agcacaggacctcgaaaggttggctactggaatgatatggataaattagtcttgattcaa
gatatgcctactcttggcaatgacacagcagctattgagaacagaacagtggttgtaacc
acaattatggaatctccctatgttatgtacaagaaaaatcatgaaatgtttgaaggaaat
gacaagtacgaaggctactgtgtagatctggcatcggaaattgcaaaacatattggtatc
aaatataaaattgccattgttcctgatggaaaatatggagcaagggacgcagacactaag
atctggaatgggatggtaggagagcttgtgtatgggaaagcagagattgctattgcccct
ctgacaatcacattggttcgagaggaagtcatcgatttttctaagccttttatgagttta
ggcatctctatcatgatcaaaaaacctcagaaatctaaaccaggagtcttttccttcttg
gaccctctggcctatgagatctggatgtgcatagtgtttgcatacattggtgtcagtgtg
gtcttgttcctagtcagtaggtttagcccatatgagtggcacacagaagaacctgaggat
gggaaggaaggacccagtgaccagcctcccaatgaatttggcatctttaacagcctttgg
ttttccctgggtgcctttatgcaacaaggatgtgacatttcacccagatccctgtcaggt
cggattgttggaggcgtgtggtggttcttcacactcatcattatatcgtcctacactgct
aatctggctgcattccttactgtggagagaatggtctcccccatagaaagtgcagaagac
ctggccaaacaaacagaaattgcctatggaacacttgattctgggtcaacaaaagaattc
ttcagaagatcaaaaatagcagtgtatgaaaagatgtggacctacatgcgatcggcagag
ccgtctgtgttcactagaactacagctgagggcgtggctcgtgtccgcaagtccaagggc
aaatttgcctttctcctggagtccacgatgaatgaatacattgagcagcgaaagccctgt
gacacgatgaaagtgggaggaaacctggattccaaaggctatggtgtagcaacgcccaag
ggttcctcattaagaaatgctgttaacctcgcagttttaaaactgaatgaacaaggcctc
ttggacaaattgaaaaacaaatggtggtacgacaaaggagaatgtggcagcgggggaggt
gactccaaggacaagacgagtgccttgagcctgagcaacgtagcaggcgtcttctacatt
ctggttggcggcctgggcttggcaatgctggtggctttgatagagttctgttacaagtcc
agggcagaggcgaagagaatgaagctgactttttccgaagccataagaaacaaagccagg
ttatccatcactgggagtgtgggagaaaacggccgtgtgctgacccctgactgccccaag
gccgtacacacaggaactgcaattagacaaagttcgggattggctgtcattgcatcggac
ctaccataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (27)   
   RefSeq(nuc) (7)   
   GenBank (10)   
   EMBL (10)   
Protein domain (6)   
   Pfam (6)   
All databases (63)   

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