KEGG   Rattus norvegicus (rat): 29707Help
Entry
29707             CDS       T01003                                 

Gene name
Gabra5
Definition
(RefSeq) gamma-aminobutyric acid type A receptor alpha 5 subunit
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04723  Retrograde endocannabinoid signaling
rno04727  GABAergic synapse
rno04742  Taste transduction
rno05032  Morphine addiction
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    29707 (Gabra5)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    29707 (Gabra5)
   04723 Retrograde endocannabinoid signaling
    29707 (Gabra5)
  09157 Sensory system
   04742 Taste transduction
    29707 (Gabra5)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    29707 (Gabra5)
   05033 Nicotine addiction
    29707 (Gabra5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    29707 (Gabra5)
Ion channels [BR:rno04040]
 Ligand-gated channels
  GABA-A
   29707 (Gabra5)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N
Motif
Other DBs
NCBI-GeneID: 29707
NCBI-ProteinID: NP_058991
RGD: 61859
Ensembl: ENSRNOG00000010803
UniProt: P19969
Position
1q22
AA seq 464 aa AA seqDB search
MDNGMLSRFIMTKTLLVFCISMTLSSHFGFSQMPTSSVQDETNDNITIFTRILDGLLDGY
DNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
NNLLARKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTS
TGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
KIKKKERELILNKSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKT
YNSISKIDKMSRIVFPILFGTFNLVYWATYLNREPVIKGATSPK
NT seq 1395 nt NT seq  +upstreamnt  +downstreamnt
atggacaatggaatgctctctagatttatcatgaccaaaacgctccttgtcttctgcatt
tccatgaccttatccagtcactttggcttttcacaaatgccaactagttctgtacaagat
gagaccaatgacaacatcacaatattcaccaggatcttggacgggctcttggatggctat
gacaacagactgcggcctgggctgggagagcgaatcacgcaggtgcgaacagacatctat
gttaccagctttggcccagtgtccgacacggaaatggaatataccatagatgtatttttc
cgtcaaagctggaaagatgaaaggctgcggtttaaggggcctatgcaacgtctccctctc
aacaaccttcttgccaggaaaatctggaccccagacacattcttccacaatgggaagaag
tccattgcgcacaacatgacgacacccaacaagctgctgaggctggaggatgatggcaca
cttctctacaccatgcgcctgacgatctctgctgagtgtccaatgcagcttgaggacttt
ccgatggatgcccatgcttgtcccctgaaatttggcagttatgcttaccctaattcggaa
gttgtctatgtttggaccaatggttccaccaagtctgtggtggtggcagaagatggctcc
agactcaaccagtaccacctcatggggcagacagtaggcactgagaacatcagcaccagc
acaggtgaatatacaatcatgactgctcattttcacctgaagaggaagatcgggtacttt
gtcatccagacgtaccttccctgcatcatgacagtcatcttatcccaggtgtctttttgg
cttaatcgagaatctgtcccagctaggacagtttttggagtgaccacagtgctgaccatg
acaaccctcagcatcagtgcccggaattcgctgcccaaagtggcctatgccacagccatg
gactggttcattgctgtctgctatgcatttgtcttctctgccctgattgaatttgccaca
gtcaactactttacaaagagaggatgggcctgggatggcaagaaggccttggaagcagct
aaaatcaagaaaaaagaacgtgaactcatactaaataagtcaacaaatgcttttacaact
gggaagttgacccatcctccaaacatcccaaaggagcagcttccaggcgggactgggaat
gctgtgggtacagcctcaatcagagcatctgaggagaagacttctgagagtaaaaagacc
tacaacagcatcagcaagatcgacaaaatgtcccggattgtgttccccattttgtttggc
actttcaatctagtttactgggcaacatatttgaatagggagcccgtgataaaaggggct
acctctccaaagtaa

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