KEGG   Rattus norvegicus (rat): 297593
Entry
297593            CDS       T01003                                 

Gene name
Usp5
Definition
(RefSeq) ubiquitin specific peptidase 5
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    297593 (Usp5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    297593 (Usp5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    297593 (Usp5)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     297593 (Usp5)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   297593 (Usp5)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    297593 (Usp5)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   297593 (Usp5)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3
Other DBs
NCBI-GeneID: 297593
NCBI-ProteinID: NP_001100089
RGD: 1308438
Ensembl: ENSRNOG00000015409
UniProt: D3ZVQ0
Position
4q42
AA seq 858 aa
MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVER
HFNKTGQRVYLHLRRTRRPKEEDSSAGTGDPPRKKPTRLAIGVEGGFDLTEDKFEYDEDV
KIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHA
FNLKQLDNPARIPPCGWRCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRET
GYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDM
NQRIGEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEK
IFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPALESGDGEQVPEQKEVQDGIAPRMFKAL
IGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYT
QRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKVALPELVRAQVPFSSCLEAYGAPE
QVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDIS
QLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDEDSFCSPHFSSPTSPMLDESVV
IQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAA
DPPPEDCVATIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSA
ADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCAS
EKPPKDLGYIYFYQRVVS
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggcggagctgagtgaggaggcgctgctgtcagtgttaccgacgatccgtgtccccaag
gcgggagaccgggtccacaaagacgagtgtgctttctctttcgacaccccggaatctgag
ggtggcctttatatctgcatgaacacattcctgggatttgggaaacagtatgtggagaga
catttcaacaagacaggccagcgtgtctacctgcaccttcggaggacccggcgaccgaaa
gaagaggactccagcgcaggcactggagacccaccccggaagaagcccacccggctggcc
attggtgttgaaggtgggtttgacctcaccgaggacaagtttgaatatgatgaggacgtg
aagattgtcattttgccagattacctggagatcgctcgggatgggttgggggggcttccc
gacattgtcagagatcgggtgaccagtgcagtggaagccctactttcggctgattcagcc
tctcggaagcaggaggtacaggcttgggatggggaagtccgtcaggtgtctaagcatgcc
ttcaacctcaagcagttggacaaccccgctcggatccctccctgtggctggaggtgctcc
aagtgtgacatgagagagaacctgtggctcaacctgacagatggctccatcctgtgcggc
cggcgctactttgatggcagcgggggcaacaaccatgctgtggagcactacagggagact
ggctaccccttagctgttaagctgggcaccatcacacccgatggagctgatgtgtactct
tacgacgaggatgacatggtcctggaccctagcctggcagagcacctgtctcactttggc
atcgacatgctgaagatgcagaagacggacaaaacaatgactgagctggagatagacatg
aaccagcggattggtgagtgggagctgatccaggagtcaggcgtgccactcaagcctctc
ttcgggcctgggtacacaggcatccggaacctgggtaacagctgctacctcaactccgtg
gtccaggtgctcttcagcatccctgactttcagaggaagtatgtggataaattggagaag
atcttccagaatgccccaacggaccctacccaagacttcagcacccaggtggcgaagctg
gggcacggccttctctctggagaatattctaagccagcactggagtcaggtgatggggag
caggtaccagaacaaaaggaagttcaagatggcattgcccctcggatgttcaaggccctt
attggcaagggccaccctgagttctccactaaccggcagcaggatgctcaggaattcttc
ctacatcttatcaacatggtggagaggaattgccggagttctgaaaatccaaatgaagtg
ttccgcttcttggtggaagagaagatcaagtgcctggccacagagaaggttaagtacact
cagcgagttgactacatcatgcagttgcctgtgcccatggatgcagcccttaacaaagag
gagcttctagagtatgaagagaagaagcggcaagcagaagaggagaaagtagcactgcca
gagctggttcgggcccaggtgcccttcagctcctgcctggaagcctatggggcccccgag
caggtggatgacttctggagtacagctctacaggcgaagtcggttgctgtcaagactaca
cggtttgcctccttccctgactacctggtcatccagatcaagaagttcacctttggctta
gactgggtgcccaagaagctggatgtgtccattgagatgccagaggagctagatatttcc
cagctgaggggcacagggctacagcccggagaggaggagctgcctgacattgccccaccc
ctggtcactccggatgagcccaaaggtagccttggtttctatggcaacgaagacgaagac
tccttctgctcccctcacttctcctctccaacatcgcccatgctggacgagtccgtcgtc
atacagttggtggagatgggcttccctatggacgcctgccggaaagccgtgtactataca
gggaacagtggtgctgaagcagccatgaactgggtcatgtcacacatggatgacccagat
tttgccaatcccctcatcctgcctgggtccagtgggcctggctccacaagtgcagcagcc
gatcccccaccagaggactgtgtggccaccattgtctccatgggcttctcacgggaccag
gccctgaaagctctacgggccacgaacaatagcttagagcgggctgtagactggatcttc
agtcacattgatgacctagatgcagaagctgctatggacatctcagagggacgctcagct
gctgactccatctctgagtctgtaccagtgggacctaaagtccgggatggtcctggaaag
tatcagctctttgccttcattagtcacatgggcacgtctactatgtgtggtcactatgtc
tgccatatcaagaaggaaggcagatgggtgatctacaatgaccagaaagtgtgtgcctcg
gaaaagccacccaaggacctgggctacatctacttctaccagagagtggtcagctaa

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