KEGG   Rattus norvegicus (rat): 299620
Entry
299620            CDS       T01003                                 
Symbol
Sf3a2
Name
(RefSeq) splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    299620 (Sf3a2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    299620 (Sf3a2)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    299620 (Sf3a2)
 Complex B
    299620 (Sf3a2)
 Complex C
   U2 SnRNP specific factors
    299620 (Sf3a2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus PRP4
Other DBs
NCBI-GeneID: 299620
NCBI-ProteinID: NP_001011986
RGD: 1308627
Ensembl: ENSRNOG00000019349
UniProt: Q6AXT8
Position
7:complement(9560182..9566205)
AA seq 471 aa
MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDTEMGQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA
FKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNG
LPPRPPLPDALPPPPPGGLPLPPMPPTGPAPSGPPGPPQMPPPAPGVHPPAPVVHPPTSG
VHPPAPGVHPPAPVVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP
APGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPPAPAVHPQAPGVHPPAPGIHPQAPG
VHPQPPPGVHPAAPGVHPQPPGVHPTPMPPMLRPPLPSDGPGNMPPPPPGN
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggactttcagcaccgacctggaggcaaaactgggagtgggggcgtggcctcctcctca
gagagcaaccgggatcgaagagagcgcctgcggcaactggccctggaaaccatcgacatc
aataaggacccgtatttcatgaagaaccacctgggatcctatgagtgcaaactctgcttg
actctgcataacaatgaggggagctacctggcccatacccaagggaagaaacatcagact
aacttggcccggcgagctgccaaggaggccaaagaagcccccgcccagcctgcaccagag
aaggtcaaggtggaggtgaagaagtttgtgaagattggccgccctggctacaaagtgacc
aagcagagggacacagagatgggccagcagagcctactgttccagattgactaccctgag
attgcagagggtgtcatgccccgccaccgcttcatgtctgcctatgagcagaggatcgag
cccccggaccgccgctggcagtacctcctcatggctgctgagccctatgagaccatcgcc
ttcaaggtgccgagccgcgagatcgacaaggctgagggcaagttttggacccactggaac
cgagagaccaagcagttttttcttcagttccactttaagatggagaagcccccagcccct
cccagcctcccagcaggacccccaggcgtcaagcggcccccgcccccactcatgaacgga
ctacctcctcgcccaccactccctgatgccttgcccccacctccacctggtggcctgcct
cttcctcctatgccccccactgggcctgctccctctgggccccctggacctccccagatg
cccccaccagctcctggggtacaccccccagccccagtagtacacccaccaacatctggg
gtccatcccccagctcctggggtgcaccccccagccccagtggttcatccaccaacatct
ggggtccatcccccagctcctggggtccatcctccagcccctggagtgcaccctccagcc
cctggagtgcacccaccagcccctggggtgcaccccccagctccaggggtccacccccca
gctccaggggtccaccccccagctccaggggtccaccccccagctccaggggtccaccct
cctccatcagctggagttcatcctcaggctccaggggtgcatccacctgctcctgcagtc
caccctcaagcccctggtgtacaccccccagctcctgggatccaccctcaggcaccaggg
gtgcacccccagcctcctcctggagtccaccctgctgccccaggggtccatcctcagcct
ccaggggttcaccctactcctatgccccccatgctaaggcccccccttccctcggatggc
cctgggaacatgcctccgcctcccccaggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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