KEGG   Rattus norvegicus (rat): 300084
Entry
300084            CDS       T01003                                 

Gene name
Rbx1
Definition
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03420  Nucleotide excision repair
rno04066  HIF-1 signaling pathway
rno04110  Cell cycle
rno04114  Oocyte meiosis
rno04120  Ubiquitin mediated proteolysis
rno04141  Protein processing in endoplasmic reticulum
rno04310  Wnt signaling pathway
rno04350  TGF-beta signaling pathway
rno04710  Circadian rhythm
rno05170  Human immunodeficiency virus 1 infection
rno05200  Pathways in cancer
rno05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    300084 (Rbx1)
   04120 Ubiquitin mediated proteolysis
    300084 (Rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    300084 (Rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    300084 (Rbx1)
   04350 TGF-beta signaling pathway
    300084 (Rbx1)
   04066 HIF-1 signaling pathway
    300084 (Rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    300084 (Rbx1)
   04114 Oocyte meiosis
    300084 (Rbx1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    300084 (Rbx1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    300084 (Rbx1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    300084 (Rbx1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    300084 (Rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    300084 (Rbx1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    300084 (Rbx1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     300084 (Rbx1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   300084 (Rbx1)
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     300084 (Rbx1)
   ECV complex
     300084 (Rbx1)
   Cul3 complex
     300084 (Rbx1)
   Cul4 complex
     300084 (Rbx1)
   Cul7 complex
     300084 (Rbx1)
   Cul9 complex
     300084 (Rbx1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      300084 (Rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      300084 (Rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3
Other DBs
NCBI-GeneID: 300084
NCBI-ProteinID: NP_001029307
RGD: 1308453
Ensembl: ENSRNOG00000058914
UniProt: Q498D8
Position
7
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgtggatacccccagcggcaccaacagcggcgcgggcaagaag
cgctttgaagttaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgtatcgagtgtcaggccaaccag
gcctcagctacttcggaagagtgcacggttgcttggggagtctgtaaccacgcttttcat
ttccactgcatctctcggtggctcaaaaccaggcaggtgtgccccttggacaacagagag
tgggagttccaaaagtatgggcattag

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