KEGG   Rattus norvegicus (rat): 303353
Entry
303353            CDS       T01003                                 
Symbol
Psmd11
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11
  KO
K03036  26S proteasome regulatory subunit N6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    303353 (Psmd11)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    303353 (Psmd11)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    303353 (Psmd11)
   05012 Parkinson disease
    303353 (Psmd11)
   05014 Amyotrophic lateral sclerosis
    303353 (Psmd11)
   05016 Huntington disease
    303353 (Psmd11)
   05017 Spinocerebellar ataxia
    303353 (Psmd11)
   05020 Prion disease
    303353 (Psmd11)
   05022 Pathways of neurodegeneration - multiple diseases
    303353 (Psmd11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    303353 (Psmd11)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     303353 (Psmd11)
SSDB
Motif
Pfam: RPN6_N PCI RPN6_C_helix TPR_12 TPR_ESP1 DDRGK TPR_3 DUF2153
Other DBs
NCBI-GeneID: 303353
NCBI-ProteinID: NP_001380935
RGD: 1306450
Ensembl: ENSRNOG00000005538
UniProt: F1LMZ8
Structure
Position
10:65923669..65977523
AA seq 422 aa
MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKT
GQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSE
KRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYD
SIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLA
DFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKAD
VERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcggccgcagcggtggtagagttccagagagctcagtctctactcagcactgaccgg
gaggcctccatcgacatcctccactccatcgtgaagcgtgacattcaagaaaatgatgag
gaggcagtccaggtcaaagagcagagcatccttgaactggggtctctcctggcgaagact
ggacaagctgctgagcttggaggactcctgaagtatgtacgacctttcttgaattccatc
agtaaagctaaagcagctcgtctggtccggtctcttcttgatctgtttctagatatggaa
gcagctacagggcaggaggtcgagctatgtttagaatgcatcgaatgggccaaatcagag
aaaagaaccttcttacgccaagcattggaggcaaggctggtgtctttgtattttgatacc
aagaggtaccaggaagcattacatttgggttctcagctgcttcgggagttgaaaaagatg
gatgataaagctcttttggttgaagtacagcttttagaaagcaaaacttaccatgctctg
agtaatctgccgaaagcccgagctgccttaacctctgctcgaaccacagcaaatgctatc
tactgcccccctaaattgcaggccactctggacatgcagtcaggtattattcatgcagca
gaggagaaggactggaaaactgcatactcgtacttctatgaggcattcgaaggctatgac
tccatcgatagccccaaggccatcacatctctgaagtacatgttgctgtgcaaaatcatg
ctcaacaccccagaagatgtccaggctttggtgagcggaaagcttgcacttcggtatgca
gggaggcagacagaagcattgaaatgtgtggctcaagctagcaagaacagatcactggca
gattttgaaaaggccctgacagactacagggcggagctccgggacgacccaatcatcagc
acacatttggccaagttgtacgataacttactggaacagaatctgatccgggtcattgaa
cctttctcccgagtacagatcgaacacatatctagcctcatcaaactctccaaggccgac
gtggaaagaaaattatcacagatgattcttgacaagaagtttcatgggattttggaccag
ggggagggtgtcctgatcattttcgatgaacccccagtagataaaacttatgaagctgct
ctggaaacaattcagaacatgagtaaagtagtagactccctctacaacaaagccaagaag
ctgacatag

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
3D Structure (4)   
   PDB (4)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

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