KEGG   Rattus norvegicus (rat): 303412
Entry
303412            CDS       T01003                                 

Gene name
Rnf43, RGD1305204
Definition
(RefSeq) ring finger protein 43
  KO
K15694  RING finger protein 43 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    303412 (Rnf43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    303412 (Rnf43)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     303412 (Rnf43)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    303412 (Rnf43)
SSDB
Motif
Pfam: ZNRF_3_ecto zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-RING_5 Prok-RING_4 FANCL_C zf-ANAPC11 zf-C3HC4_3
Other DBs
NCBI-GeneID: 303412
NCBI-ProteinID: NP_001129393
RGD: 1305204
Ensembl: ENSRNOG00000007606
UniProt: D3ZP81
Position
10q26
AA seq 782 aa
MSGGHQLQLAVLWPWLLMATLHAGFGHTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVSPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRSAAEQLQQPLGLTKPVVLIWGSDAEKLMEFVYKNR
KAYVWIELKEPPAWANYDVWILLTVVGTVFVIILASVLRIRCRPHPSRPDPLQQRTARAI
SQLATRRYQASCRRARAEWPDSGSSSSSAPVCAICLEEFTEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSFSQALGASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLG
PSRNSVAQTPRPRPFLPSQEPSMGSRHQRLPRASHLRAPEEQQHLAVSPGHPYAQGWGPN
RLRCTSQHPNACPVALRRARPHESSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSV
VNCTDISLQGVHGSSSTFRSSLSSDFDPLVYCSPEGALQGKEVQPSMTSRPRSLDSVVPT
GETQVSSHIHYHRHRHHHYKKQFQWHSRKPGLETGVPQSRPAASHTQLEPSLPDQQLTTP
NPAVSSMLPNPQRPRALTEPAPGLAEAVSPSPSPNPSLLNLQKSNLPVRYPQRKRRGGPS
EALPTSQPQDLTVHTACPVPPHYSPSLAYPWPPEVHPLIFRPPGLDRRLLHDVPGPCYSS
SQPVWLYLNPRQPLGPCLPGEGHSKWSFDTPEDRRCPYSHCQVLPAQPGSEEELEELCEQ
AV
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgagtggtggccaccagctgcagctggctgtcctctggccctggctgctgatggcgacg
ctgcatgcaggctttggacacacaggactggtgctggcagcagcggtggagtcggaaaga
tcagcagaacagaaagctatcatcagagtgatccccctgaaaatggaccccacaggaaaa
ctgaacctcaccttggaaggtgtgtttgctggtgttgcagaagtgagtccagcagaaggg
aagctaatgcagtcccaccccttgtacctgtgcaacgccagtgatgacgacaacctagag
cctggcttcatcagcatcgtcaagctggagagtcctcggcgggctcctcgcccctgcctg
tcactggccagtaaggcgcgaatggctggcgagcgaggagccagcgctgtgctctttgac
atcacagaagaccgatcagctgctgagcagctgcagcagcccctggggctgactaagccg
gtggtgctgatctggggtagtgatgcggagaagctgatggagtttgtgtacaagaatcgg
aaggcctatgtgtggattgagctgaaggagcccccggcttgggcaaattacgatgtgtgg
atcctcctgactgtggtgggcacggtctttgtgatcatcctggcttcggtgctacgcatc
aggtgtcgcccccaccctagcagaccggaccctcttcagcagcggacagcccgggccatc
agccagctggccaccaggaggtaccaagccagctgtagacgggctcgagctgagtggcca
gactcagggagcagcagcagctcggcccctgtgtgtgctatctgtctggaagagttcaca
gaggggcaggagctccgggtcatttcctgcctccacgagtttcatcgaacctgtgtggac
ccctggctacaccagcatcggacttgccctctctgcatgttcaacatcgtagagggagat
tcattttcccaagccctgggagcttctccatcctaccaggaaccaggcagaaggctccac
ctcattcgccaacatcctggccacgcccactatcatctcccttctgcctacctgctgggc
ccttccaggaattcagtagcccagaccccaagacctagacccttcctgccctcccaggag
ccaagtatgggctctcggcatcagcgccttcccagggcttcccatctccgggcaccagaa
gagcagcaacacttggcagtatcccctgggcacccctacgcccagggctgggggccaaat
cgcctccgatgtacctctcagcatcccaacgcttgcccagtggccctacggcgggcccgg
cctcatgagagcagtgggtctggagaaagctactgtacggaacgcagtggttacttggct
gatgggccagccagcgactccagctcagggccctgtcatggctcttctagtgactcagtg
gtcaactgcacggacatcagcctgcagggcgtccatggcagcagttctaccttccggagc
tccctgagcagtgactttgaccccttggtatactgtagccctgaaggggctctccagggg
aaagaggtgcaacctagcatgacctctcgaccccgctcgttggactcagtggtacccacg
ggggagacccaggtttccagccacatacactatcaccggcaccgccaccaccactacaaa
aagcagttccagtggcatagcaggaagcctggcctagaaactggggttccacagtccagg
cctgctgcttctcacactcagctggagccatctctccctgaccagcagctcaccacaccc
aacccagcagtttcctcaatgctccccaacccacaacggcccagggcccttacggagcca
gcccctggcctagcagaagctgtcagccctagccccagtcccaaccccagtcttttgaat
ttgcagaaatccaacctccccgtcagatacccacagagaaaacggcggggtggcccctca
gaagccctgccaacctctcagccccaggacttgactgtgcacacagcttgccccgttccc
ccccactacagccccagtctagcatacccttggcccccagaggttcatccattgatattc
agacctccaggcctggataggaggctgctacatgatgtaccaggcccctgttactcaagt
tcacagccagtgtggttgtatctgaatccccgccagcctctgggaccatgcttacctgga
gagggacattccaagtggagttttgacaccccagaggacaggagatgtccttactcacac
tgccaggtgctgccagcccagcctggctcggaagaggagcttgaagagctgtgtgaacag
gctgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system