KEGG   Rattus norvegicus (rat): 303637
Entry
303637            CDS       T01003                                 
Symbol
Abca8
Name
(RefSeq) ABC-type organic anion transporter ABCA8 isoform X1
  KO
K05650  ATP-binding cassette, subfamily A (ABC1), member 8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    303637 (Abca8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    303637 (Abca8)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    303637 (Abca8)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 SMC_N MtN3_slv MMR_HSR1 AAA_23 Dynamin_N
Other DBs
NCBI-GeneID: 303637
NCBI-ProteinID: XP_038943365
RGD: 1307069
Ensembl: ENSRNOG00000004040
Position
10:complement(95416984..95490647)
AA seq 1620 aa
MIKREISVRQQTCALLQKNLLKKWRLRRETLMEWMSSLLLLLFLCWYPHGHEATDFSSVP
TKDLGRVDSFTQSGFMIGYTPVTSTTRQIMEKVAAVPFMAGRKVLGLLDEENIRELTESH
QEVIRVIFSDTFSYHLKFQFGQRIPKSREHGDHEAHCFEMYEDVDCLISIFWKKGFVALQ
AAINAAIIETTTNHSVMEKLLSVSGKFMKIHPFVRQEGILTDFFIFTCIVSFSPITYFVS
ISVARERKKMKGLMMMMGLRDSAFWLSWGLLYAGFVFVMALSLALVIKSVQFLILTSFTV
VFSLFLLYGLSMISLAFLMSVLVRKSVLTGLTVFLLTIFWGSLGFTALYRYLPAPLEWTL
SLFSPFAFTLGMAQLLRVDYDLNSNAPPDPAGSSNLIAATNFMLAFDALLYLALTMYFEK
VLPNEYGHQRSPLFFLKPSFWVQPRKPAHVILEDGIDPAPLSGGSFEPVSPEFHGKESIR
IRNISKEYKGKPSKIEALKDLTLDIYEGQITALLGHSGAGKSTLLNILSGLSVPTKGSVT
IYNNRLSEMADLESVFRISGVCPQSNVQFDFLTVRENLRLFAKIRGVPPQEVEKEVQRVL
LELEMKNIQDILARNLSGGQKRKLTFGTAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE
RKADRVVLFSTQFMDEADILADRKVFISRGKLKCAGSSLFLKKKWGVGYHLSLQLKEVCV
PENITSLVKQHIPEAKLSAERERTLVYTLPLETTYRFPELCQSLDSCPGLGIDSYGVSMT
TLNEVFLKLEGKSAIEEPEVDIVGEGQTERSGDTERLMEMEQTLSTLTETKKKTGSLALW
RQQTCAIAKARLLKLKHERKTLLSVLLVLGVALCPLLFESIKMKILQSAYTWDLSPHSYF
LAPGQQPHGMLTQLLIINKTEASIDDFIQSVERQNIALEVDASGARDGTDDPSFNGALTV
SGGEKNHSFSLACNTKRLNCFPVLMDVLSNGLLGMVKPSARIRTDRSTYFVDEITNPLQQ
LGKTTFWLTLTSACPPYIAMSSVTDYKNKVWFQLRVSGLFPSAYWFGQALVDIPLYCFVF
LFMSLMDYLLGFPDATLIVITHVLQIPCSVGYAISLIFLTYVISFISRKGKKNSGIWSLC
FYIITMFSVVAMLLDFNVDAILYCIIFLLPPSTLIGCLILSMHLFIYRISREESIVEPFL
VFLIPLLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVHQNPEEPEGEDEDVQME
RMRTASALASTSFDEKPVIVASCLRKEYAGKWKHCLSKKKAKIATRNVSFCVRKGEILGL
LGHNGAGKSTSLKMISGDTKSTAGQVLLKGSREGDALGFLGYCPQENALWPNLTVKEHLE
VFATVLGLSKSHAAVTITRLADALQLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLL
DEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGS
IQHLKSKFGKDYLLEMKVKTLEQVELLNTEVLRLFPQAARQERYSPLMVYKLPVEDVQPL
SQAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQEMDGFEEELDSSIKWKLLPQEEV
NT seq 4863 nt   +upstreamnt  +downstreamnt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattacagaagaacctt
cttaagaaatggagactgagaagggagaccttgatggaatggatgagctcattgctcctt
ctgcttttcttgtgttggtatccgcatggtcatgaagctactgacttttcctcagtgccc
accaaggatctgggacgagtcgattcttttacacaatctgggttcatgatagggtataca
cctgtcaccagcacgacccgacagataatggagaaggtagctgctgtccctttcatggca
ggtagaaaagtcctgggactgttggatgaagaaaacatcagggaattaacagaaagtcat
caggaagtaataagagtcattttctctgatacgttctcatatcatctgaaatttcaattt
ggacagagaatcccaaagtcaagggaacatggagatcatgaagctcattgttttgagatg
tatgaagatgttgactgtctgatatcaatattctggaagaaaggatttgtggctcttcaa
gctgccatcaatgctgccattatagaaaccacgacaaaccattcggtgatggagaaactg
ctgtcagtttcggggaaattcatgaagatccatcctttcgtcaggcaagaggggattttg
actgatttcttcattttcacctgcatcgtttccttctccccaatcacctattttgtgtca
atcagtgttgcaagagagaggaaaaagatgaagggcttgatgatgatgatgggtcttcga
gattcagcattctggctatcctggggtctgctctatgctggctttgtcttcgtgatggcc
ctatccctggcacttgttatcaagtctgtccagtttcttattctgaccagcttcacggtg
gtctttagcctcttcctcctgtacggattgtctatgatctctttggccttcctaatgagc
gtcttggtgaggaagtctgtcctcactggcctgactgtgttccttctcaccatcttctgg
ggaagcctcggtttcacagccctgtacagatatctccctgcacctttggaatggactctc
agtctttttagccccttcgccttcacactaggaatggcccagctcttacgcgtggactat
gatttaaattctaacgcaccccctgatccagctggtagctcaaatctgattgcagcaacc
aatttcatgctggcatttgatgcgcttttgtatctggccctgacgatgtactttgaaaaa
gttctgccaaatgagtatggacaccagcggtctcccctgtttttcctgaaaccctcattt
tgggtacaaccacgaaagcctgctcacgtgattcttgaagatggaatagatcccgctcct
ttatcaggtggctcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccagtaaaatagaagccttgaaagac
ctgacactggacatatatgaaggccaaatcacagctttacttggtcacagtggagctggg
aagtcaacactgttaaatatccttagtggattatctgtccctaccaaaggttccgtcacc
atctataacaatagattatcagaaatggctgacctagaaagtgtgttcaggatctcagga
gtttgtccacaatccaatgttcaatttgacttccttactgtgagagaaaacctcagactt
tttgctaaaataagaggagttccaccccaagaggtggagaaagaggtgcaaagggttttg
ctggaattggaaatgaaaaatattcaagatatccttgctcgaaacctaagtggtggacag
aagagaaagctaactttcggaactgccattttaggagattctcagattttcctactggat
gagcccactgctgggctggatcccttttcaaggcaccgggtgtggaatctcctgaaggag
cgcaaagcagaccgtgtggtcctcttcagcacgcagttcatggatgaagctgacattctg
gctgacaggaaagtgttcatctccagggggaagctgaagtgtgcaggctcatctctcttc
ctgaagaagaaatggggcgttgggtatcacttaagtttgcagctgaaggaagtctgtgtt
ccggagaacatcacatcactggtgaaacagcacatccctgaggccaagctgtcagctgaa
agggagaggacacttgtctatacattacccttagaaacaacctatagatttccagaactt
tgccagagtcttgacagctgtcctggactgggaattgatagctatggtgtttccatgacg
actttgaatgaggtgttcctgaagctagaaggaaaatcagcaattgaagaaccagaggtt
gacatagtgggagaaggacaaacagagagatctggggacacagagagactcatggagatg
gagcagactctctctacacttacggagacgaagaagaagacaggcagcttggctctctgg
agacagcaaacctgtgcaatcgcaaaggctcgcttgttgaagttaaagcatgaaaggaaa
acacttctctctgtgctcttggttctgggagttgccctttgccctcttcttttcgaaagt
atcaagatgaaaatacttcagagcgcttacacttgggatctttccccacactcgtacttc
cttgcccctggacaacagccccacggcatgctcactcagttactgatcatcaataagaca
gaggcaagcattgatgactttatccagtctgtggagcgccagaacatagctttggaagtc
gatgcttccggagccagagatggcacggatgacccatccttcaacggagcccttacagtg
tctggcggtgagaagaaccacagcttttcactggcatgcaataccaagagattgaactgt
ttcccagttctgatggacgtcctaagcaatgggttactgggaatggttaaaccatcagcc
cgcatccgaaccgacagaagcacctacttcgtggatgaaattactaatcctttacaacag
ctggggaagaccacgttctggctgactctgacctcggcttgccctccttatatagccatg
agcagcgtcacagactataagaacaaagtgtggttccagctgcgggtctccggcctcttc
ccttccgcttactggttcgggcaggcactggtggatattccgctctactgcttcgtcttc
ctcttcatgtctttaatggactacctcttaggcttcccagatgccacgcttattgttata
actcacgttctacaaatcccgtgttctgtcggctatgccatatccctgatcttcttaaca
tacgtgatttccttcatttctcgcaaggggaaaaaaaacagcggcatttggtcactttgc
ttctatatcatcaccatgttctcggtggttgcaatgttgctggatttcaatgtggatgct
atactgtactgcatcatctttttactaccgccgtccactctgattggatgtctgatctta
tctatgcatcttttcatatatcggatctctcgtgaagaatcaattgtagagccatttctg
gtattcctcattcctttacttcatgttttcatttttatttttacccttcgatgtctggaa
tggaagtttggaaagaaaacaatgaggaaggatcccatttttagaatctctccaagaaac
aatgatgtgcatcaaaacccagaagagccagaaggtgaggatgaagatgttcaaatggag
agaatgagaacagcgagtgccttggcatccaccagttttgatgagaagccagtcattgtt
gccagctgcctacgcaaagagtacgcagggaaatggaaacattgcctttctaagaagaag
gctaagatagccaccaggaatgtctcattctgtgtcaggaaaggtgagattctaggattg
ctgggacacaatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaaa
tccacagctgggcaggtgctactgaaagggagcagagaaggggacgccctggggttcctg
gggtactgtcctcaagagaacgctctgtggcccaacctcactgtgaaggagcacctggag
gtatttgctacagtgttgggcctgagcaaaagtcacgctgcagtcaccattacaaggttg
gcagatgcgctccagctgcaggaccagctgaagtctccggtgaagacactgtcagaggga
gtgaagagaaagctgtgttttgtgctgagcatcctgggaaacccttctatattgcttctg
gatgagccttcaactgggctggatcctgaagggcaacagcaaatatggcaagcaatcagg
gccatcataaaaaatacagacaggggcgcccttctcaccacccattacatggcagaggct
gaggctctgtgtgaccgcgtggccattctggtgtctggaaggttgaggtgtattggatca
atccaacatctcaaaagcaaattcggcaaagattacctgctggagatgaaggtgaagact
ctcgagcaggtggagctcctcaacacagaggtcctaaggcttttcccccaggctgctagg
caggaaaggtactctcctctcatggtttacaaattaccagtggaagatgtgcaaccttta
tcccaagcgttcttcaagttagagaaggttaagcagacttttgacttggaagagtatagc
ctctctcagtctaccttggagcaggtcttcttagagctctccaaggagcaagagatggat
ggctttgaggaagaactagactcctctataaaatggaagctcctcccacaggaagaggtt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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