KEGG   Rattus norvegicus (rat): 305441
Entry
305441            CDS       T01003                                 
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
  KO
K24313  SH3 domain and tetratricopeptide repeat-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    305441 (Sh3tc1)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    305441 (Sh3tc1)
SSDB
Motif
Pfam: TPR_12 TPR_8 SH3_1 TPR_2 TPR_7 TPR_1 SH3_9 SH3_2 TPR_19
Other DBs
NCBI-GeneID: 305441
NCBI-ProteinID: NP_001100696
RGD: 1305610
Ensembl: ENSRNOG00000007993
UniProt: A6IJZ0
Position
14:79230322..79274622
AA seq 1345 aa
MRSFREEEATSEDLSTMGQGPEEPPGGCSLEDKIQSISMGLPTSQERTGPEEAEATTVRG
DVAPPCGMVGQAAEPPSNQMAVYPTDLTLQLLAVRRKSGLRSPSLQQTLRSRLRLLENDS
REVARVLGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQTFW
LLSPSEEEETAILIYVNKDALKQTHKSLLAQEGSFFVLCPDHCVRRTKEPQGAGKGPQTL
RRASGVTLGVPVVETVSSSPTPSMSSKAEAVEAEPEPLTPFHQWTLRVPWDPIDESMSGP
GTPDAQFMRFGLASAIADFQGSGPEEMSFSVGDVIEIVGAQVPGLPWCLGQHMASGQVGF
VRTGLVRMQGPASDLESSIFLSEEERSFFRSEAHFSDEDARRLLCRTSGTDVCTTCSLDW
LEEAEGEQLEQQEMSLPHLNPEPHESLHMVKNVLEKCKACPDHPEDPVSWSLGAVSSRVS
SPDLEEPPFCLDPDDDWTDPEPPDSLLQVLSAPGYRAQFRSLYDISLPCLSTALYSFDDE
EELAERLAQARGVAKKVDLGMALARLCLLLGRLCARKLKLSQARVYFEEALGALEGSFGD
LSLVAAVYSSLATVYLKQKNGEKCVQLAPKAAALLLGTPGHSCSTDAELLKYALRRVVCG
LSPQAEARACFLLARHYTHLKQPEEALPYLERLLRLNRDVGTPQASWPEDCYLLLADIYG
RKCLPHLALSCLKVSSLWTRCSLAGSLRSVDLVLQNAPGPNSQRSTGHSLPSQIAHYLRQ
ALASLPPGTGQTLRGPLYASLAQLYSYHQQYGQAIAFMSQAAEADTAAGVHPVVDRLVAL
AWLHLLCGKSLVAMDILKCVSDAAVANKDQECVMMNMVAMALKRMGRTRQAAEGYFRALH
MAYSQGHLQSQAVVLANFGALCLQAGARSLAQHYLREAVGLFSQLPSGVCGRDFTQVLLW
LGQLCTRRTLPQQAKCYYEWAFLVAVETDHLESQLQAVQKLCHFYSKVMPNEVRCVIYHE
FQLALARKTADKVLEGQLLEAISQLYLSLGTERAYKSALDYTKRSLGIFIDLQQKEKEAR
AWLQAGKIYYILRQNELVDLYIQVAQNAALYTGDPKLGLELFEAAGDIFFNGTWEREKAV
SFYRDRALPLAVTVGDQEVELRLCNKLVALLSALEAPQEGLEFAHEALALSITLGDRLNE
RVAYHRLATLHHRLGHGELAEHFFLKALSLCTSPLEFDEETLYYVKVYLVLGDIIFYELK
DPFDAAGYYQLALAAAVDLGHKKAQLKIYTRLATIYHNFLMDREMSLFFYQKARTFASEL
NLRRTNLVPQHFCSRAPWLAPGYPS
NT seq 4038 nt   +upstreamnt  +downstreamnt
atgaggagcttcagggaggaggaggcgacttctgaggatctgtccaccatggggcagggc
cctgaggagcctccaggaggctgtagcctggaagacaagatccagagtatatccatgggc
ttacctactagtcaggagagaacagggcctgaggaggctgaggcaacaacagtcagaggt
gacgttgctcctccctgtggcatggttgggcaagctgctgaacccccttccaatcaaatg
gcagtgtatccgacagacctcaccctgcaattgttggctgtgaggcggaagagtggactg
cggagccccagcctacagcagaccctgagaagccgactccgcctgctggagaatgacagc
cgggaagtggcccgagtacttggagaactgtcagccaggctgctgtccatccacagtgac
caggaccggatcgtggtgacgtttaagacttttgaagaaatctggaagttttccacctat
catgctcttggcttcacacatcactgcctggagaacctgctggtggaccagaccttctgg
ctgctttcccccagtgaggaggaggagactgccatcctcatatatgtaaacaaggatgcc
ttgaagcagacacacaagagccttctcgcacaagaagggtccttcttcgttctgtgtccc
gaccactgtgtgaggaggacaaaggaaccccaaggtgcagggaagggcccccagaccctc
agacgggcttccggggtcactctgggagtaccagttgtggaaacagtctcctcatccccc
acacccagcatgtcctccaaagcagaagcagtagaggctgagccagagcccttgactcca
tttcaccagtggactctcagggtcccatgggatcccatcgatgaatccatgagtggacct
gggacgcctgatgcccagttcatgaggtttggcctggcctctgcaatagctgacttccag
ggctcaggcccggaagagatgtccttcagcgttggtgatgtcatcgagatcgtcggtgcc
caggtgcctggcctgccctggtgtttgggccagcacatggcctctggccaggtgggcttt
gtgaggactggccttgtccgcatgcagggcccggcatctgacctggaaagttcaattttc
ctcagcgaggaagaaaggtcattcttcagaagtgaggctcacttctcagacgaggatgcc
cggcggctcctgtgcaggacatctggcacagatgtgtgtaccacatgcagcctggactgg
ttagaagaagctgagggagaacagctggagcaacaagaaatgtctctgcctcacctgaac
ccagagccacatgagagtctgcacatggtaaagaacgttttagagaagtgcaaggcctgc
cctgaccaccctgaagaccctgtatcctggagccttggagcggtgtccagcagagtgagt
tcaccggaccttgaggagccccccttctgcctggatcctgacgatgactggacagaccct
gagcctccggactcactgctgcaggtcctgagtgcccctggttatagggcccagttccgg
agcctgtatgatatctcacttccctgcctgagcaccgcactctatagctttgatgatgaa
gaagagttggctgaacgcttggcacaggcccgaggagttgccaagaaagtcgatttgggc
atggccctggcaaggctctgcctcctgctggggcggctgtgtgcccgaaagctcaaacta
tcccaggcccgggtgtactttgaagaggccctgggggctctggagggaagttttggggac
ctctccctggtggcggccgtgtatagcagcttggctactgtgtacctgaagcagaagaac
ggggagaagtgtgtgcagctggcacccaaagccgcagcgctgctcctgggaacgcccggc
cactcctgcagcacagatgccgagctcctgaagtacgcactgcgcagggtcgtctgtggc
ctcagcccacaggccgaggcccgggcctgcttcctgctggcccggcactacacccacctc
aaacagcctgaggaggcactgccatacttggagagactgcttcgcctcaacagggatgtg
gggaccccgcaggcctcgtggcctgaagactgttacctgcttctggcggacatctatggc
cggaagtgcctgccgcacctggcattgagctgcctcaaggtgtcctcactgtggacaaga
tgctctctggctggctccttgaggagtgtggacctggtactccagaatgctcctgggcca
aacagccaaaggagcacaggtcatagccttccctcccagattgctcactacctcagacag
gcattggcctctctgcctcccggcacgggacagacactgcgagggccactctatgccagc
ctggctcaattgtacagttaccaccagcagtacggccaggccatagccttcatgtctcag
gctgcagaagctgacactgcagctggggtccaccctgtcgtggaccgcttggtggcgctc
gcctggctgcacctgctttgtgggaaaagcttagtagccatggacatcctgaagtgcgtc
tcagacgcggccgtggccaataaggaccaggaatgtgttatgatgaacatggtggccatg
gccctgaagaggatgggcaggacccggcaggctgctgaaggctacttccgagctctgcac
atggcctacagccagggccacctgcagagccaggcagtggtcctagctaactttggggcc
ctgtgcctgcaagctggcgcacgcagcttggcccagcactacctgcgggaggccgtgggg
ctcttctcccagctgcccagtggcgtgtgtggccgtgacttcacccaggtgctcctgtgg
ttgggccaactgtgtacgcgccggaccctcccccagcaggccaagtgctactatgagtgg
gcctttctggtggctgtggagacggaccatctggagagtcagttacaggcggtgcaaaag
ctgtgccacttctacagtaaggtcatgcccaacgaggtgcgatgtgtcatctaccatgag
ttccaactggctctggcacgcaagaccgctgacaaggtgctggaggggcagctcctggag
gccatcagtcagctctacctgtcgctgggcactgagcgggcctacaagtcggctctggat
tacactaaacggagcctggggattttcatcgacctgcagcagaaggagaaggaggcacgc
gcctggctgcaggcagggaagatctactatatcctccgtcagaatgagctggtggacttg
tacatccaggtggcacagaatgcagccctgtataccggggaccctaagctggggctggaa
ctgtttgaggcagctggggacatcttcttcaatgggacctgggagcgggagaaagctgtg
tccttctaccgggaccgggcactgcccctggctgtgactgtaggagaccaagaagtggag
ctgcgcctgtgcaacaagctggtggccctgctgtctgcactggaggcaccccaggagggc
ctagagttcgcccatgaggccctagcactcagcatcaccctaggtgaccggctgaatgag
cgagtggcctaccacaggctagccaccctgcaccaccggctgggccacggggaactggcc
gagcacttcttcctgaaggctctgtcgctctgcacctcgcccctggaatttgatgaggag
accctgtactatgtgaaggtctacctggtactgggtgacatcatcttctatgagctgaag
gaccccttcgatgcagctgggtattaccagctggctctggcagcagccgtggacctgggc
cacaagaaggctcagttgaagatctatacacgcctggctaccatctaccacaacttcctc
atggaccgagaaatgtccctcttcttctaccaaaaagcaaggacctttgcctcagaactg
aatctccgcaggaccaacctggtaccccagcacttctgtagccgggcaccctggttggcc
cctggctacccatcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (9)   
   Pfam (9)   
All databases (43)   

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