KEGG   Rattus norvegicus (rat): 306962Help
Entry
306962            CDS       T01003                                 

Gene name
Hist1h2ac
Definition
(RefSeq) histone cluster 1, H2ac
  KO
K11251  histone H2A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04217  Necroptosis
rno05034  Alcoholism
rno05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    306962 (Hist1h2ac)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    306962 (Hist1h2ac)
  09165 Substance dependence
   05034 Alcoholism
    306962 (Hist1h2ac)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    306962 (Hist1h2ac)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    306962 (Hist1h2ac)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic Type
  Nucleosome assembly factors
   Histones
    306962 (Hist1h2ac)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   306962 (Hist1h2ac)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID: 306962
NCBI-ProteinID: XP_001062714
RGD: 1597155
Ensembl: ENSRNOG00000056411
UniProt: G3V9C0
Position
17p11
AA seq 130 aa AA seqDB search
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
TESHHKAKGK
NT seq 393 nt NT seq  +upstreamnt  +downstreamnt
atgtctggacgcggcaagcagggcggcaaggctcgcgccaaggccaagacccgctcctcc
cgggccggcctgcaattcccggtgggtcgcgtgcaccggctgctccgcaagggcaactac
tccgagcgggtgggcgccggcgccccagtgtatctggcggccgtgctggagtacctgacg
gccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatcatc
ccgcgccacctgcagctggccatccgcaacgacgaggagctcaacaagctgctgggccgc
gtgaccatcgcgcagggcggtgtcctgcctaatatccaggcggtgctgctgcccaagaaa
acggaaagccaccacaaggccaagggaaagtaa

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