KEGG   Rattus norvegicus (rat): 307351
Entry
307351            CDS       T01003                                 
Symbol
Tubb6
Name
(RefSeq) tubulin beta-6 chain
  KO
K07375  tubulin beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04540  Gap junction
rno04814  Motor proteins
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    307351 (Tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    307351 (Tubb6)
  09142 Cell motility
   04814 Motor proteins
    307351 (Tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    307351 (Tubb6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    307351 (Tubb6)
   05012 Parkinson disease
    307351 (Tubb6)
   05014 Amyotrophic lateral sclerosis
    307351 (Tubb6)
   05016 Huntington disease
    307351 (Tubb6)
   05020 Prion disease
    307351 (Tubb6)
   05022 Pathways of neurodegeneration - multiple diseases
    307351 (Tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    307351 (Tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    307351 (Tubb6)
   04147 Exosome [BR:rno04147]
    307351 (Tubb6)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     307351 (Tubb6)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    307351 (Tubb6)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   307351 (Tubb6)
  Exosomal proteins of colorectal cancer cells
   307351 (Tubb6)
  Exosomal proteins of bladder cancer cells
   307351 (Tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 307351
NCBI-ProteinID: NP_001020846
RGD: 1305887
Ensembl: ENSRNOG00000018371
UniProt: A6IXU7 F7FF15
Position
18:63213287..63222926
AA seq 447 aa
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSKKYV
PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVNDGEEAFEDEDEEEINE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagattgtgcacatccaggcgggccagtgtgggaaccagatcggtaccaagttt
tgggaagtgatcagcgatgagcacggcatcgacccggccggaggctacgtgggcgactcg
gcgctgcagctggagaggatcagcgtctactacaatgagtcatcctctaagaagtacgta
cccagggctgccctggtggacttggagcccggcaccatggacagcgtgaggtctgggcct
tttgggcagctcttccggcctgacaacttcatcttcggacagacgggtgccgggaacaac
tgggccaagggccactacacggagggcgcggagctggtggactcggtgctggatgtggtg
cgcaaggagtgtgagcactgcgactgcctgcagggcttccagctcactcactcgctgggc
ggtggcacgggctcgggcatgggcacgctgctcatcagcaagatccgagaggagtaccca
gaccgcatcatgaacaccttcagcgtcatgccgtctcccaaggtctcagacaccgtggtg
gaaccctacaatgccacactgtcggtgcaccagctggtggagaacaccgatgagacctac
tgcatcgacaatgaggccctctacgacatctgcttccgcacgctcaagctgaccacaccc
acttacggggacctcaaccacttggtatctgctaccatgagtggtgtcaccacatcactg
cgtttccctggccaactcaatgccgacctgcgcaagctggctgtgaacatggtgcccttc
ccgcgcctgcatttcttcatgcccggattcgccccgctcacagcccggggtagtcagcag
taccgtgccctgacagtgcctgagctcacacagcagatgttcgatgccaagaacatgatg
gctgcctgtgacccacgccatggccgctacctgaccgtcgccactgtcttccggggcccc
atgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaacagcagctac
tttgtggagtggattcccaacaacgtgaaggtagccgtgtgtgacatcccaccacggggc
ctgaagatggcctccaccttcataggcaatagcactgccatccaggagctattcaagcgc
atctcagagcagttctcagccatgttccgccgcaaggccttcctgcactggttcaccggc
gagggcatggatgagatggagttcaccgaggccgagagcaacatgaatgacctggtgtcc
gagtaccagcagtaccaggacgccacagtcaacgatggggaagaggcttttgaagatgag
gatgaagaagagatcaacgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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