KEGG   Rattus norvegicus (rat): 307505
Entry
307505            CDS       T01003                                 
Symbol
Ctnna1
Name
(RefSeq) catenin alpha-1
  KO
K05691  catenin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04390  Hippo signaling pathway
rno04520  Adherens junction
rno04670  Leukocyte transendothelial migration
rno05100  Bacterial invasion of epithelial cells
rno05200  Pathways in cancer
rno05213  Endometrial cancer
rno05226  Gastric cancer
rno05412  Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    307505 (Ctnna1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    307505 (Ctnna1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    307505 (Ctnna1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307505 (Ctnna1)
  09162 Cancer: specific types
   05226 Gastric cancer
    307505 (Ctnna1)
   05213 Endometrial cancer
    307505 (Ctnna1)
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    307505 (Ctnna1)
  09166 Cardiovascular disease
   05412 Arrhythmogenic right ventricular cardiomyopathy
    307505 (Ctnna1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    307505 (Ctnna1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     307505 (Ctnna1)
SSDB
Motif
Pfam: Vinculin GIT1_C I_LWEQ DivIC
Other DBs
NCBI-GeneID: 307505
NCBI-ProteinID: NP_001007146
RGD: 1359485
Ensembl: ENSRNOG00000005796
UniProt: F7F7X1 Q5U302
Position
18:27002330..27135009
AA seq 908 aa
MTAVHTGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHV
LAASVEQATENFLEKGDKIAKESQFLKEELVAAVDDVRKQGDLMKSAAGEFADDPCSSVK
RGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYRAL
KPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKAN
RDLIYKQLQQAVTGISNAAQATASDDASQQQGGGGGGGELAYALNNFDKQIIVDPLSFSE
ERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRK
ERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKE
YAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSK
LAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGL
DRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEAL
SSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQT
EDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQ
MCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLA
YLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYV
ASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALS
EFKAMDSI
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgactgccgtccacacaggcaacataaacttcaaatgggaccccaaaagtctagagatt
agaactctggctgttgaaagactgttggagcctcttgttacacaggtgacaaccctggta
aacaccaatagtaaaggaccctctaataaaaagagaggccgttctaagaaggcccatgtt
ttggctgcatctgttgaacaagcaactgagaatttcttggaaaagggggacaaaatagca
aaagagagtcagtttcttaaggaggagcttgtggctgctgtggacgatgttcgaaaacaa
ggagatctgatgaagagcgctgctggggagtttgcagatgatccgtgctcttctgtgaag
cgaggtaacatggttcgggcagctcgagctctgctttccgccgttacccggctgctgatt
ctggctgacatggcagatgtctacaagttacttgttcagctgaaagttgtggaagacggc
atattgaagctgaggaatgctggcaacgagcaggatctagggatacagtacagagctctg
aaaccagaagtagataagctgaacatcatggcagcaaaacgacaacaggaactgaaagat
gtgggccatcgtgatcaaatggctgcagctagaggaatcctgcagaaaaatgttcccatc
ctctacactgcatcccaggcatgcctgcagcaccccgatgtagcagcctacaaggccaac
cgggacttgatatacaagcagctgcagcaggccgtcacggggatctctaatgctgcccag
gctactgcatcagatgacgcctcccagcagcagggtggcggcggcggcgggggagagctg
gcgtatgctctcaacaactttgataaacaaatcattgtggaccccttgagcttcagcgag
gaacgctttagaccttcactggaagaacgcctggaaagcataattagcggagctgccctg
atggccgactcatcctgcacacgtgatgaccggcgtgagcgcattgtggcagagtgtaat
gctgtccgccaggctctacaggacctgctatcagaatacatgggcaatgctggacgcaag
gagaggagcgacgcactcaactctgccatagataaaatgaccaagaagaccagggacctg
cgtcgacagcttcgcaaagctgtcatggaccacgtatcagattccttcctggagaccaat
gtccctcttttagtactgattgaagctgcaaagaatggaaacgagaaggaggttaaggag
tatgcccaggtttttcgtgaacacgccaacaaactgattgaggtcgccaacttggcctgt
tcaatctccaataatgaagaaggcgtgaagctcgttcggatgtctgcaagtcagttagaa
gcgctctgtcctcaggttatcaatgctgcgttggctttagcggcaaagccacagagtaaa
ctggcccaagagaacatggatctttttaaagagcagtgggaaaaacaagtccgtgttctc
acagatgctgttgatgacattacttccattgatgacttcttggctgtctcagagaaccac
attttggaagatgtgaacaagtgtgttatcgctctccaagagaaagacgtggatgggctg
gatcgcactgctggggccattcgaggccgggcagcccgagtcattcatgtcgtcacctca
gagatggacaactacgagccaggagtttacacagaaaaggttctagaagccaccaaactc
ctctccaacacagtcatgccgcgtttcactgagcaagtggaagcagctgtggaagccctc
agctcagaccccgcccagcctatggatgagaatgagttcatcgacgcctcccgtctggta
tacgacggcatccgggacatccgcaaggccgtgctgatgataaggacccccgaggagttg
gacgactctgacttcgagactgaagactttgatgtcagaagcaggaccagtgtccagaca
gaagatgaccagctgatagctggacagagcgcccgggcgatcatggctcagcttcctcag
gagcagaaggcaaagatcgcagagcaggtggccagcttccaggaggagaagagcaagctg
gacgctgaggtgtccaagtgggacgacagcggcaatgacatcattgtgctggccaagcag
atgtgcatgatcatgatggagatgaccgacttcacccgaggcaaagggccactcaaaaac
acatcggatgtgatcagtgctgccaagaaaattgctgaggcaggatccaggatggataag
cttggccggaccatcgcagaccactgcccagactccgcctgcaagcaggacctgctggcc
taccttcagcgcatcgcgctctactgccaccagctcaacatctgcagcaaggtcaaggct
gaagtacagaacctcggtggagagcttgtcgtctctggggtggacagcgccatgtccctg
atccaggcagccaagaacttgatgaacgctgtagtgcagacagtgaaggcgtcctacgtg
gcttccaccaaataccagaagtcacaggggatggcgtccctcaaccttcctgctgtgtca
tggaaaatgaaagcccccgagaagaagcccttggtgaagagagagaagcaggatgagaca
cagaccaagatcaagcgggcctcccagaagaagcacgtgaaccctgtgcaggccctcagc
gagttcaaggccatggacagcatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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