KEGG   Rattus norvegicus (rat): 310588
Entry
310588            CDS       T01003                                 
Symbol
Tchh
Name
(RefSeq) trichohyalin
  KO
K18626  trichohyalin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    310588 (Tchh)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filament-binding proteins
    310588 (Tchh)
SSDB
Motif
Pfam: S_100 EF-hand_1 EF-hand_8 EF-hand_6
Other DBs
NCBI-GeneID: 310588
NCBI-ProteinID: NP_001385665
RGD: 1309635
Position
2:181787109..181795463
AA seq 1592 aa
MSPLIRSIVDITEVFNQYASQSCDGASLSKRELKNLLERELGDVLQKPHDPETVDLTLEL
LDRDCNGRVDFNEFLLFLFKIAQACYYALDQAAELGEKRTLTKEKRSLSQDRRQEDQRRF
EPRDRQLDEEPGRGSWQKRREQEERAEELRLEQRDRQHRDEEQQLQRRELQELEERLAEK
EPLSWSKGRDAEEFSEVEEQQRQERQELKGKGQTEERRLQRRRQEELREPLLRREQDLNR
RQELRQELRREPELRREQELSRGQEQRREQELRQELRREQELRREQVLRREQELRQEQRR
EQELRHEQELRQELRREQALAEEDEQTRVREPDQSITQRWQWQLESEAEARQNKVYSRPR
RQEQRLRQELEERQLREEEGQRRDLQRQRPAEEARQRYQWERPQRAEERLEQEQRFRDRE
EQRFREERLQRAELQDSLLEEEQRRRQAERREPNASWELREESQRRHTLYTKPSLRQRRE
EELREERLLQEEQRQQRERKYRREEDLQQEEERLQQDEEQLQREKRRLQQERQYQEEDLQ
LEEERLQQEEERLQRERRRLQQERQYQEEDLQRLQDEDRRRDLKWQWQPRKEVEVRSNRL
FTKRREDEETIQQLEDSREQGRRQDRRPLQNEQEERRELEQERRRLQQRDRQILEEEQLQ
REQQREARRRDETFQEEEQLLEESRRQQQEREGKFLEEERQLQTEREEQRRHQEQEREFR
EEEEERLQEPEKELRQERDRKSREEQERRQQREEEQLRRQERDRRFRREQEQRQETEEEQ
LRDRPFRREQERRQEREEEQLRDRKFRREQEPRQEREEEQLRDRKFRREQEPRQEREEEQ
LRDRKFRREQEPRQERVEEQLRDRKFRREQERFQEREEEQLRDRPFRREQERRQEREEEQ
LRDRPFRREQELRQEREEEQLRDRKFRREQERRREREEEQLRDRKFRREQERRREREEEQ
LRDRPFRREQERLQEREEEQLRDRPFHREQERRQEERDRPSRREQELLRELEEEQLRDRK
FRREQELRRDRKLREEEERRPELEEEQLRGQERDRLRVEEQLRQEREEEQRRRQERDRKS
REEQELRQELEEEQLRDRKFRREQELRRDRKLHDEERRQELEERQLSGQERERKFRLEQE
LRREREEEERRQQRDRKFRREEELRQELEEEQLRDRKIRREQELRRDRKFREEEERRQEE
FEEKQLRLQEPDRRFRREQELRREREEEQRRRQERDRKSREEQELRQELEEEQLRDRRIR
QELQEEELRRQERDSKFLEEQEIRRALQEEELRRQERDRKFREEQELRQELEEERLRDRK
IPREQEFRRPREEEQLRDRKFRREQEFRREPGVEQRRRQEREEEQIRFEEQQQRRQEREQ
QLRQERDRRVREEEELRQEREELLHREVGGRKFREEERFRQEREEQRRHLQERDNRRFRE
EVELRQEREEQQLRQERQERERKFREVEELRQEEEQRRRQEFDRKFREEKRLREEREGQQ
LRREKRDGQYPAEEQFARDKIRRQEQELRQEEEQRRRQERERKFQEEQIRRRQEEQRRRP
ILEPGTRQFANVPVRSSPLYEYIQEQRSQYRP
NT seq 4779 nt   +upstreamnt  +downstreamnt
atgtctccacttataagaagcattgttgatatcactgaagttttcaatcaatatgcatca
caaagttgtgatggagcatcgcttagcaagagagaactgaaaaacctccttgagagagaa
cttggagatgtccttcagaaaccacatgatccggagactgtagatctgaccctagaactt
ctggatcgtgactgcaacgggcgtgttgatttcaacgaattcctcctgttccttttcaag
attgctcaagcttgctattatgctctcgatcaggctgcagagttaggcgagaagagaacc
ctaaccaaggaaaagaggagcctgtcacaagatcgcaggcaagaagatcaaaggagattc
gagccccgggacagacaactggacgaagaacctgggcgcggaagctggcagaagagacgt
gagcaggaggagcgcgctgaggagctgaggctggagcagcgcgacaggcagcaccgcgac
gaagagcagcaactgcaaaggagagaactgcaagaactggaggagcgccttgcagaaaaa
gagcctctaagctggagtaagggtcgtgacgctgaggagttttctgaggtagaggaacag
caaaggcaagagagacaggaactcaagggcaagggccagacagaggagagaaggttgcag
aggcgccggcaagaagagctacgcgaacccctgctgaggcgcgagcaggatctgaatcgt
agacaggagctgaggcaggaactgaggcgcgaaccagagctaaggcgcgaacaggagctg
agtagaggacaggaacagaggcgcgagcaggagctgaggcaggaactgagacgcgagcag
gagctaaggcgcgagcaggtgctgaggcgcgagcaggagctgaggcaggaacagagacgc
gagcaggagctaagacacgagcaggagctgaggcaggagctcaggcgcgagcaggcgctg
gctgaggaggatgagcagacgcgagtccgggaacccgaccagagcatcacccagaggtgg
cagtggcagctcgaaagcgaggcagaagcccgtcagaacaaggtctactctaggcctcgc
aggcaagagcagaggcttcgccaggagctggaggagcgtcagctccgggaggaggagggg
caacgccgcgacctccaacggcagcgtcccgctgaggaggctcgccagcgttaccaatgg
gagaggccgcaacgggcggaggagcgcctggagcaggagcagcggttccgcgaccgggag
gagcagcgcttccgggaagagaggctgcaaagagctgagctccaggacagcctccttgag
gaagaacagaggcgacgtcaggcggagcgccgagagccaaacgcgagctgggagcttcgg
gaagaaagccagagacgccacacactgtacaccaaacccagcctgaggcagcgtagggag
gaagagctacgcgaggagcggttgttgcaagaagagcagcgccagcagcgggagaggaaa
taccgcagggaggaggatctgcagcaggaggaagagcggctgcagcaagatgaagagcaa
ctgcagcgggaaaagaggcgcctgcagcaggagaggcagtatcaagaggaggacctgcag
ctggaggaagagcggctgcagcaggaggaagagcggctgcagagagaaaggaggcgcctg
cagcaggagaggcagtatcaagaggaggacctgcagcggctgcaggatgaagatcggcgc
agggatctgaaatggcagtggcaacctaggaaagaagtcgaagttcgtagtaacaggctt
ttcaccaaacgcagagaggatgaggaaacgatccagcagctggaagactctcgagagcaa
gggagacgtcaggatcggcggcctctgcaaaacgaacaggaagagagaagagagctggag
caggagaggaggcgcctacagcagcgcgaccggcagatcctagaggaagagcagctgcag
cgagagcagcaacgggaagccagaagacgagatgagacgttccaggaggaagaacagctc
ctggaagaatcgagaagacagcaacaggagagagagggcaaattccttgaggaagaaagg
cagctgcagacggaacgggaagaacagaggcggcatcaagaacaagagagagaattccga
gaagaggaggaggagcgcctccaagaacctgagaaagaacttcggcaggagcgtgacaga
aaatcccgtgaagaacaagagcgccgccagcagcgtgaggaagagcagctgaggcgccag
gagcgggacagaagattccgccgggaacaagaacaacgccaggagactgaggaagagcag
ctgcgagacagaccattccgccgggaacaagaacgccgccaggagcgcgaggaagagcag
ctgcgggacagaaagttccgtcgagaacaagaaccccgtcaggagcgcgaggaagagcag
ctgcgggacagaaagttccgtcgggaacaagaaccccgtcaggagcgcgaggaagagcag
ctgcgggacagaaagttccgccgggaacaagaaccccgccaggagcgtgtggaagagcag
ctgcgggacagaaagttccgccgggaacaagaacgcttccaggagcgtgaggaagagcag
ctgagggacagaccattccgccgggaacaagaacgccgccaggagcgtgaggaagagcag
ctgcgggatagacctttccgccgggaacaagaactccgtcaggagcgtgaggaagagcag
ctgagggacagaaagttccgccgggaacaagaacgccgccgggagcgtgaagaagagcag
ctgagggacagaaagttccgccgggaacaagaacgccgccgggagcgtgaggaagagcag
ctgagggacagaccattccgcagggaacaagaacgcctccaggagcgtgaggaagagcag
ttgagggataggccattccaccgagaacaagaacgccgccaggaggagcgcgacagacca
tcccgccgggaacaagagctcctccgggaactcgaggaagagcagctgcgggacagaaag
ttccgccgggagcaagagctcagacgcgacagaaaactccgtgaggaagaagagcgccgc
ccggaactggaggaagagcagctgcgtggccaagagcgagaccgtttaagggtggaagag
caacttcgccaggagcgcgaggaagagcagcggcgccgccaggaacgtgacagaaaatcc
cgtgaggaacaagagctccgccaggaactcgaggaagagcagctgagggacagaaagttc
cgccgggaacaagagctcaggcgcgacagaaaactccacgacgaagagcgccgccaggag
ctagaggaaaggcagctgagcgggcaagaacgagagagaaagttccgcttggaacaagag
cttcgccgggagcgcgaggaagaggagcgccgccagcagcgtgacagaaagttccgccgg
gaagaggagctccgccaggaactggaggaagagcaactgcgggacagaaagatccgcagg
gaacaagagctcaggcgggacagaaaattccgtgaggaagaagagcgccgccaggaggag
ttcgaggaaaagcagctgcggctccaggaaccagacagaagattccgccgggaacaagag
ctccgccgggaacgcgaagaagagcagaggaggcgccaagaacgtgacagaaaatctcgt
gaggaacaagagctccgccaggaactggaggaagagcagctgagggacagaaggattcgc
caggaactccaggaagaagagctaaggcgccaggaacgtgacagtaagttccttgaggaa
caagaaatccgccgggcactccaggaagaagagctaaggcgccaggaacgtgacagaaag
ttccgtgaggaacaagagctccgccaagaactggaggaagagcggctgagggacagaaag
atcccccgagaacaagagttccgccggccgcgagaggaagagcagctgcgggacagaaag
ttccgcagggaacaagaattccgccgagagccgggggtagagcagcggcgccgccaggag
cgcgaagaggaacaaattcgctttgaggagcaacagcagcgccgccaggagcgcgagcaa
cagttaagacaagaacgcgacaggagagtccgggaggaagaagagcttcgtcaggaaagg
gaggagctgctacaccgtgaggtgggtggcaggaaattccgggaagaggagcgattccgc
caggaaagagaggaacagcggcgtcacctccaggagcgggacaacagaagattccgcgag
gaagtagagctcaggcaagaaagggaagagcagcagctgcgtcaagagcgccaagagcgt
gagagaaaattccgtgaggtagaagagcttcgccaggaagaagagcagcgccgccgccag
gagtttgacaggaaattccgggaagagaaacgcctgcgtgaggaacgcgagggccagcaa
ctgcggagggagaagcgagatggtcagtacccggctgaggagcaatttgccagggataag
attcgtcgccaggaacaagaactacgtcaagaagaggaacaaagacgtcgccaagagcgg
gagagaaaattccaagaagagcagatccgtcgtaggcaagaggagcagaggcgccgccca
atcctagagcctggcacacgccagtttgccaacgtcccagtgcgttccagtcctctctac
gagtacatccaagagcagaggtctcaataccgcccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system