KEGG   Rattus norvegicus (rat): 310685Help
Entry
310685            CDS       T01003                                 

Gene name
Polr3c
Definition
(RefSeq) RNA polymerase III subunit C
  KO
K03023  DNA-directed RNA polymerase III subunit RPC3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03020  RNA polymerase
rno04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    310685 (Polr3c)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    310685 (Polr3c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    310685 (Polr3c)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     310685 (Polr3c)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: RNA_pol_Rpc82 HTH_9 TFIIE_alpha
Motif
Other DBs
NCBI-GeneID: 310685
NCBI-ProteinID: NP_001012081
RGD: 1311545
Ensembl: ENSRNOG00000033560
UniProt: Q5XIL3
Position
2q34
AA seq 533 aa AA seqDB search
MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHH
NLVIYHVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMTMSA
VVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPLVPDTDSSDPGPPPPAPNL
VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKKPRCTDNEEPTPDDGIYWQVNLDR
FHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTPSGAPFTQPLSSNEIFRSLPVGY
NISKQVLDQYLTLLADDPLEFIGKAGDSGGGMYVINLHKALASLSTATLESVIQERFGSR
CARIFRLVLQKKHLEQKQVEDFAMIPAKEAKDMLYKMLSENFISLQEIPKTPDHAPSRTF
YLYTVNVLSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIMASMQATGAEE
VQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIESTMKRQ
NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt
atgactcaagcagaaattaaactgtgctctttgttgctacaagagcattttggtgagatt
gtagaaaaaattggagtccacctaatcagaactgggagccagccacttagagtaattgcc
catgacacaaaagcatcactggaccaggtgaaaaaagccctttgtgtcctcattcaccat
aacctggtcatctatcatgtgcataaacgcggtgtggtggagtatgaagcccaatgcagc
cgggtactgcggatgcttcggtacccccggtacatctatactaccaaaacactgtatggt
gacactggagagctgattgttgaggagcttctgctgaatggcaaaatgacaatgtcggct
gttgtgaagaaagtagcagaccgactcacagagaccatggaggatggcaagaccatggac
tacgctgaggtgtcaaatgcatttgttcgactggcagatactcactttgtacagcgctgt
cccctggttcctgacactgacagttctgaccccgggccgccgccacctgccccaaacctt
gtcattaatgaaaaggacatgtacctagttcccaaactgagcttgataggaaaaggtaag
aggaggagatcatctgacgaagatgctgctggagagcccaaggccaagaaaccaagatgc
acagataatgaggagcccacaccagacgatgggatttattggcaagtcaacctggacaga
ttccaccagcacttccgtgaccaagcaattgtgagcgcagtggcaaaccgaatggaccag
acaagcagcgagattgtgcggacaatgctccgaatgagtgagattaccactccctctggt
gcgccgtttactcagccactgtcctccaatgagatcttcagatccctgcccgtcggatat
aatatctctaaacaggttctggatcagtacctcacgctgctggcagatgacccactagaa
tttattggaaaggctggcgacagtggcggaggaatgtatgtcatcaacctccataaggca
ttagcatccctatccactgcaactctggagtctgtcatccaagagagattcgggtctcgc
tgtgcccggatattccgtctggtgttgcagaagaagcacctggagcagaagcaggtggag
gactttgcaatgatccctgcaaaggaggcaaaggacatgctgtataagatgctctcggag
aacttcatatcactgcaggaaattcctaaaacgccagaccacgccccgtccaggaccttc
tatctgtacaccgtgaatgtgctgtcagccgccaggatgctgttgcacaggtgctacaag
agcatagccaacttgatagaaaggcggcaatttgaaacaaaagagaacaagcggctacta
gaaaagtctcagcgggtggaagccatcatggcatcaatgcaggccacgggtgcagaggag
gtacagctgcaggagatcgaggagatgatcacagcccccgagcggcagcagctggagaca
ctgaaacgcaacgttaacaagttggatgccagtgagatccaggtagatgaaaccatcttc
ttactggaatcatacatcgagagcaccatgaagagacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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