KEGG   Rattus norvegicus (rat): 311163
Entry
311163            CDS       T01003                                 

Gene name
Ctnnd1, Catns
Definition
(RefSeq) catenin delta 1
  KO
K05690  catenin (cadherin-associated protein), delta 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04015  Rap1 signaling pathway
rno04520  Adherens junction
rno04670  Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    311163 (Ctnnd1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    311163 (Ctnnd1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    311163 (Ctnnd1)
SSDB
Motif
Pfam: Arm HEAT_2 Cnd1 Ebp2 Atx10homo_assoc HYPK_UBA
Other DBs
NCBI-GeneID: 311163
NCBI-ProteinID: NP_001101210
RGD: 1305643
Ensembl: ENSRNOG00000030790
UniProt: D3ZZZ9
Position
3q24
AA seq 932 aa
MDDSEVESTASILASVKEQEAQFEKLTRALEEERRHVSAQLERVRVSPQDANSLMANGTL
TRRHQNGRFVGDADLERQKFSDLKLNGPQDHNHLLYSTIPRMQEPGQIVETYTEEDPEGA
MSVVSVETSDDGTTRRTETTVKKVVKTMTTRTVQPVPMGPDGLPVDASAVSNNYIQTLGR
DFRKNGNGGPGPYVGQAGTATLPRNFHYPPDGYGRHYEDGYPGGSDNYGSLSRVTRIEER
YRPSMEGYRAPSRQDVYGPQPQVRVGGSSVDLHRFHPEPYGLEDDQRSMGYDDLDYGMMS
DYGTARRTGTPSDPRRRLRSYEDMIGEEVPPDQYYWAPLAQHERGSLASLDSLRKGMPPP
PNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPILVGLLDHP
KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLS
SHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSE
RSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERY
QEALPSVANSTGPHAASCFGAKKGKGKKPTEDPANDTVDFPKRTSPARGYELLFQPEVVR
IYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTSEHERV
VKAASGALRNLAVDARNKELIGKHAIPNLVKNLPGGQQNSSWNFSEDTVVSILNTINEVI
AENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKK
SDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIPMSNMGSNTKSLDNNYST
LNERGDHNRTLDRSGDLGDMEPLKGAPLMQKI
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggacgactcagaggtggagtcgaccgccagcatcttggcctctgtgaaagaacaagag
gcacaatttgagaagctgacccgggcgctggaggaggagcggcgccatgtgtcggcgcaa
ctggaacgcgtccgggtctcaccacaagatgccaactcactcatggccaacggcaccctc
acccgtcggcatcagaacggccggtttgtgggcgatgctgaccttgagagacagaaattt
tcagatttgaaactcaacggaccccaggatcacaaccaccttctgtatagcactatcccc
aggatgcaggagccaggtcagatcgtggaaacctacacagaggaggaccctgaaggagcc
atgtctgttgtttctgtggagacctcagatgatgggaccactaggcgcacagagaccaca
gtcaagaaagttgtgaagacgatgacaacgcggacagtgcagcctgtccccatggggcca
gatgggctgcctgtggatgcctcagcagtctccaataactatatccagaccttgggccgt
gatttccgcaagaatggcaatgggggccctggtccctatgtggggcaggcgggcactgca
actcttcctaggaacttccactatcctccagatgggtatggccgacactatgaagatggt
tatccaggtggcagtgacaactatggcagtctgtcccgagtgacccgaattgaggagcgg
tataggcccagcatggagggctaccgggcacccagtagacaagatgtctatgggccccag
ccccaggttcgagtaggtgggagcagtgtagatctgcatcgttttcatccagagccttat
gggctagaggatgaccagcgcagcatgggctatgatgacctagattacggcatgatgtct
gattatggtactgcccgtcggacaggaacaccctcggaccctcgacgacgcctcaggagc
tatgaagacatgattggtgaagaggtgccacctgatcagtactattgggctcctttagct
cagcacgagcggggaagtttagcaagcttggatagtctgcgcaagggaatgcccccgcct
ccaaactggagacagcctgagctgccagaggtgattgccatgctaggcttccgcttggat
gctgttaagtccaatgcagctgcatacctgcagcacttatgctaccgcaatgacaaggtg
aagactgatgtgcggaagctcaagggcatcccgatattggtaggattgttagaccatccc
aaaaaggaagtgcacctcggagcctgtggagctctcaagaatatctcttttggacgtgac
caagataacaagattgccataaaaaactgtgatggtgttcctgccctggtcagattgctc
cgaaaggctcgtgatatggacctgactgaagtgattactggaaccctgtggaatctctca
tcccatgattcaatcaaaatggagattgtggaccatgcgctacacgccttgacagatgaa
gttatcattccgcattctggttgggagagagaacctaatgaagactgtaagccacggcat
attgaatgggagtcagtgctcaccaacacagctggctgccttagaaatgtaagctcggag
aggagtgaagcccggcggaaacttcgggagtgtgatggcctagttgatgccctcattttc
attgttcaggcagaaattgggcagaaggattcagacagtaaacttgtggagaattgtgtt
tgcctccttcggaacttatcatatcaagttcatcgtgaaatcccacaggcagagcgttac
caggaggcacttcctagtgtggctaacagtactgggccacatgctgccagttgctttggg
gccaagaagggcaaagggaaaaagcctaccgaggatccagcaaatgatacagtggatttc
cctaaaagaactagtcctgctcggggctatgaactcttatttcagccagaagtggtgcga
atatacatttcactccttaaggagagcaagacacctgccatcctagaagcctcggctgga
gctatccagaacttgtgtgctgggcgctggacatatggcagatacatccgctctgctctt
cgtcaagagaaggctctctctgccatagctgacctcctgaccagtgaacacgagcgagta
gtgaaagctgcctctggggcactgagaaatctggctgtggatgctcggaacaaagagtta
attggcaaacatgctattcctaacttggtaaagaatctgccaggaggtcaacagaactcc
tcctggaatttctctgaagacaccgtggtctctatattgaacaccatcaacgaagttatt
gctgagaacttggaagccgccaaaaagcttcgagagacccagggtattgagaagctggtg
ttgatcaacaaatcagggaatcgctcagaaaaagaagtccgggcagcagctcttgtcctg
cagacaatctggggctataaggagcttcggaagccactggaaaaagaggggtggaagaaa
tcagacttccaggtgaatctaaacaatgcatctagaagccagagcagccattcatatgat
gatagcactctccccctcattgaccggaaccaaaaatcagataagaaacctgaccgggaa
gaaattccaatgagcaatatggggtcaaacacaaaatcattagataacaactattccaca
ctgaatgagagaggagaccacaacagaacactggaccgatctggggatttgggtgatatg
gagccattgaagggagcacccttgatgcagaagatttag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (14)   
   UniProt (1)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system