KEGG   Rattus norvegicus (rat): 312641
Entry
312641            CDS       T01003                                 
Symbol
Fancd2
Name
(RefSeq) Fanconi anemia group D2 protein homolog
  KO
K10891  fanconi anemia group D2 protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    312641 (Fancd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    312641 (Fancd2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FANCD2-I complex
     312641 (Fancd2)
SSDB
Motif
Pfam: FancD2 FANCI_S2
Other DBs
NCBI-GeneID: 312641
NCBI-ProteinID: NP_001001719
RGD: 1303172
Ensembl: ENSRNOG00000061085
UniProt: Q6IV68 A6IBS9 A0A8I5XW04
Position
4:146679014..146743422
AA seq 1454 aa
MVKMVSKRSRLDFEDKETLAEDASKIMKQPLSKLAKKSCGSHEVEENGSVFVRLLKASGL
TLKTGDNQNQLGVDQIIFQRKLFQALRKHPSYPKVIEEFVNGLESYTEDIDSLRNCLLSC
ERLQDEEASMGTFYSKSLIKLLLGIDILQPAIIKMLFEKVPQFLFESESRDGISMPRLII
SQLKWLDRIVDSKDLTTQMMQLISVAPVNLQHDFITSLPEILGDSQHANVGKELSELLVQ
NTSLTVPILDVFSSLRLDPNFLSEIRQLVMGKLSSVRLEDLPVIVKFILHSVTDSTSLEV
IAELREKLNVQHFTLPSRIQASQSKLKSKGLASSSGNQENSDKDCIVLLFDVIKSAIRYE
KTISEAWIKAIERIQSAAEHKALDVAMLLIIYGTSTQTKKGVERLLRNKIQSDCIQEQLL
DSTFSTHCLVLKDICPSILLLAQTLFHSQDQRIILFGSLLCKYAFKFFDTYCQQEVVGAL
VTHVCSGNEAEVDAALDVLLELIVLNASAMRLNAAFIKGILDYLENMSPQQIRKIFCILS
TLAFSQQPGTSNHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAEDRTMPSNSTQ
RSASVSSEQHTQVTSLLQLVHSCTEHSPWASSLYYDEFANLIQERKLAPKTLEWVAQTIF
NDFQDAFVVDFCAVPEGDFPFPVKALYGLEECNTQDGIVINLLPLFFQEFAKDVSQVTSQ
ESSQKSMSPLCLASHFRLLRLCVARQHNGNLDEIDALLDCPLFLPDLEPGEKLESMSAKD
RSLMCSLTFLTFNWFREVVNAFCQQTSPEMKGKVLSRLKDLVELQEILEKYLAVIPDYVP
PFTSVDLDTLDVIPRSNSAVAAKSRHKGKTGGKKQKADSSTASCTDTLLTEDTSECDVAP
SGKSQVDKESTGKEGKTFVSLQNYRAFFRELDIEVFSILHSGLVTKFILDTEMHTEATEV
VQLGPAELLFLLEDLSQKLENRLTPSFTKRVCFFKNKGSRNIGFSHLHQRSVQDIVHCVV
QLLTPMCNHLENIHNFFQCLGAENLSVNDKARVTAQEHYTMSSCYQKLLQVFHALLAWKG
FTHQSNHRLLRSALEVLASRLKQTEEGQPLEELLSQSFSYLQNLQHSIPSFQCGLYLLRL
LMALLEKSAVPTQKKEKLASLAKQLLCRAWPHGDKEKNPTFNDHLHDLLCIYLEHTDNVL
KAIEEITGVGVPELVNAPKDASSSTFPTLTRHTFVIFFRVMMAELEKTVKGLQAGTATDS
QQVHEEKLLYWNMAVRDFSILINLMKVFDSYPVLHVCLKYGRRFVEAFLKQCMPLLDFSF
RKHRDDVLSLLQTLQLNTRLLHHLCGHSKIHQDTRLTKHVPLLKKSLELLVCRVKAMLVL
NNCREAFWLGTLKNRDLQGEEIISQHPSSPENTSEDSEDGMTSYVSRNRAIEDGEDEAND
GQDRDSDESDDSSS
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggtcaaaatggtttccaaaagaagtcggttagattttgaggataaagaaaccctggca
gaagatgcctccaaaatcatgaagcaacccctttccaagttggcaaagaagtcttgtggt
tctcatgaagttgaagaaaatggcagtgtttttgtaaggcttcttaaggcgtcaggactc
actctgaaaactggagacaaccaaaatcagctaggtgtggatcagataatcttccaaagg
aagctctttcaggccttgaggaagcatccttcttatcccaaagtaatagaagaatttgtt
aatggcctggagtcctacactgaggacattgacagtctcaggaactgcctgctgtcttgt
gagcgcctgcaggatgaggaagccagcatgggcacattttactccaagagtctgatcaag
cttcttctggggattgacattttgcagcctgccattatcaaaatgctatttgaaaaagtg
ccacagtttctttttgaaagcgagagcagagatgggatcagcatgccccgactcatcatc
agtcagctaaagtggctggatagaatcgtggacagcaaggacctcacaacccagatgatg
cagttgatcagtgttgctccagtgaatttacaacatgacttcatcactagccttcctgag
atcctaggggattcccagcatgctaatgtggggaaagagctcagtgagctgctggtgcag
aatacttcactgactgttccgatcttggatgtcttttccagtctccgacttgacccaaac
ttcctgtctgagatccgccagttggtgatgggcaagctgtcatctgtccgtctagaggac
ttacctgtgatagtaaagttcattcttcattctgtgacagacagcacttcactagaggtg
attgctgagctgcgggagaagttgaacgtccagcattttaccttgccgtcacgaattcag
gcttcccaaagcaagttgaaaagtaaaggattagcaagctcttcaggaaatcaagaaaac
agtgataaagactgtattgttctcctctttgatgtaataaagtcagccattagatacgag
aaaaccatttcagaagcctggatcaaggcaattgaacgcattcagtcagcggctgaacat
aaggctttggacgtggcaatgttgctcatcatctatggaaccagcactcagacaaagaag
ggcgttgagaggcttctgagaaacaagattcagtcagactgcattcaagaacagctcctt
gacagtacgttctctacacattgcttggttcttaaggatatttgcccatctatccttctg
ctggctcagactttgtttcactcccaagaccagaggataattttgtttggcagtcttcta
tgcaaatatgcctttaagttttttgatacctactgccagcaggaagtggttggtgcttta
gtaacccatgtatgcagtgggaatgaggctgaagttgatgctgcattagatgtcctcctg
gagctgattgtgctaaacgcctctgccatgaggctcaacgctgcttttattaagggcatt
ttagattatttggaaaatatgtcccctcaacaaatacgaaaaatcttctgtattctcagc
actctagcatttagccaacagcccggaaccagcaaccatatccaggatgacatgcacctg
gtgatccggaagcagctctctagcactgtgttcaagtacaaactcattgggatcatcggt
gcagtcaccatggccggcatcatggcagaagacagaactatgccatctaattcaacccag
aggagcgccagtgtgagcagtgaacagcacacacaggtgacttctttgttacaactggtt
cattcctgcaccgaacactctccttgggcctcttctctttattatgatgaatttgccaac
ctcatccaagaaagaaagttggctccaaaaaccttggaatgggttgctcagacgatcttt
aatgatttccaagatgcctttgtggtggacttctgtgctgttccagaaggtgactttcca
tttcctgtgaaagcgctctatggactggaagaatgcaacactcaagatggcattgtcatc
aacctcctgccactgttctttcaggaatttgcaaaagatgtcagtcaagtgacttcacaa
gaatcaagccagaaatcaatgtctcctttgtgcctggcttcccatttccggctgctgaga
ctttgcgtggcaagacaacataacggaaacttggatgagatcgatgctctcttagattgt
cccctgttcctccctgacctggaacctggagagaaactggagtccatgtctgctaaagac
cgttcactcatgtgttcactcacattcttaactttcaactggttcagagaggttgtgaat
gccttctgccaacaaacttctcctgagatgaagggcaaggttcttagtcggctaaaggac
cttgtggagcttcaggagatcctagagaagtacttggcagtcatcccagactatgtccca
cctttcacaagcgttgacttggatactttagatgtgatacctaggagcaattctgctgtt
gctgcaaaaagcagacacaagggaaagaccgggggaaagaaacagaaagctgatagcagc
acagcatcctgcacggacacacttctcacagaagacacttcagaatgtgacgtggcaccg
tctgggaaaagccaagtagacaaggagtctacagggaaggaaggaaagacgtttgtgtca
ctgcagaattaccgtgctttcttccgagagctggacattgaagtcttctctattctgcat
tctggacttgtgaccaagttcatcttagacactgaaatgcacactgaagctacagaagtt
gtccagctggggcctgctgagctgcttttcttgctggaagatctttcccagaagctagag
aatagactcactccttcctttaccaagagagtctgtttcttcaagaataaaggaagccgg
aatattggattctcacatcttcatcagagatctgtccaggacattgtgcattgtgttgtt
cagctgctaacccccatgtgtaaccatctggagaacattcacaacttcttccagtgctta
ggtgctgagaatctcagtgtaaatgacaaggccagagtgacagctcaggagcactacacc
atgtcctcctgctaccagaagctgctgcaggtcttccatgcactcttggcttggaaagga
tttactcaccaatcaaaccaccgcctcctgcgctcagcccttgaggtccttgcgagccga
ctgaagcagacggaagaggggcagcccttggaggaactgctcagccagagcttcagttac
ttgcagaatttgcagcacagcattcccagtttccagtgtggtctttatctcctcagactt
ctgatggcccttctggagaagtctgcagtacctacccagaagaaagaaaaacttgcctct
ctggccaaacagctgctttgtcgagcatggcctcatggggacaaagagaagaaccccact
tttaatgaccacctccatgacttgctttgcatctacttggagcacacagacaatgttctg
aaggccatagaggagatcactggtgttggtgtcccagaactggtcaatgctccgaaagat
gcctcctcttctacattccccacgttgaccaggcacacctttgtcatcttcttccgtgtg
atgatggctgaacttgagaagacggtgaaaggtcttcaggctggcacagctacagattcc
cagcaggttcacgaagagaagcttctctattggaacatggctgtccgagacttcagcatc
cttatcaatctgatgaaggtatttgacagttatcctgttctgcatgtgtgtttaaagtat
ggccgtcgctttgtggaggcatttctgaagcagtgcatgccgctcctcgacttcagcttt
agaaagcatcgggatgatgttctgagcttgctgcaaacccttcagttgaacacaaggcta
cttcatcacctttgtggacactccaagattcaccaggacacaagactcaccaaacatgtg
cctttactcaaaaagtcactggagctgttagtttgcagagtcaaagccatgcttgtcctc
aacaattgtagagaggctttctggttgggtactctcaaaaaccgagacttacagggtgaa
gaaattatttcccagcatccctcctccccagaaaacacttcagaggacagtgaggatggc
atgacatcctatgtctccaggaacagagcaatagaggatggggaagatgaagcaaatgat
ggacaggacagggacagtgatgagagtgacgacagctccagttag

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