KEGG   Rattus norvegicus (rat): 315084
Entry
315084            CDS       T01003                                 
Symbol
Gsdmd
Name
(RefSeq) gasdermin-D
  KO
K20917  gasdermin-D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno04621  NOD-like receptor signaling pathway
rno04623  Cytosolic DNA-sensing pathway
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    315084 (Gsdmd)
   04621 NOD-like receptor signaling pathway
    315084 (Gsdmd)
   04623 Cytosolic DNA-sensing pathway
    315084 (Gsdmd)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    315084 (Gsdmd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    315084 (Gsdmd)
Transporters [BR:rno02000]
 Other transporters
  Pores ion channels [TC:1]
   315084 (Gsdmd)
SSDB
Motif
Pfam: Gasdermin Gasdermin_C
Other DBs
NCBI-GeneID: 315084
NCBI-ProteinID: NP_001387922
RGD: 1307261
Ensembl: ENSRNOG00000007728
Vega: OTTRNOG00000000275
UniProt: A6HS22 A0A096MJ11
Position
7:109423209..109427771
AA seq 488 aa
MPSAFAGVVKNVIKEVGGSGGELIPVDCLRNSTSFKPYCLLSRKLSSSWFWKPRYTCVNL
SIKDILEPSAPEPEPECFGNFQVSDVVDGNIQGSVTLSGTGQGKISGGAAVSGSSSASMN
VCMLRVTQQTWEIMQRERHLQQPENKILQQLRNRGDDVFVVTEVLQTKEEVQITQVHSHE
GSGQFTLPGASCLQGEGKGHQSRKKMVTIPAGSILAFRVAQLLIGSEWDILLISNEKKRT
FELPSSGHKGAVGQRRHDFSLLAVLHSIGERLSLKSDGTNEEEVIREDFQGLRAEVEAGS
SELRSLEMELRQQLLVDIGRILQDQPSMEALEASLEQGLCSGEQVEPLEGPAGSILECLV
LDSGELVPELAAPVFYLLGALAGLSETQQQLLATKALEATVLSKELELVKHVLEQSTPWQ
EQRSVPLPSRLLGDSWDEEALTWVLLEECGLTLQVEPPQVYWEPTSQGPICALYASLALL
SSLGQKSC
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgccgtcagcctttgcgggagtggtcaagaatgtgatcaaagaggtgggcggcagcgga
ggagagctcatcccagtggactgccttcggaattctaccagcttcaagccctactgcctc
ctgagcaggaaactctcaagctcatggttctggaaaccccgttatacatgtgtcaacctg
tcaatcaaggacatcctggagcccagtgctccagaaccagaaccggagtgttttggcaac
ttccaagtctccgatgtcgtcgatgggaacattcagggcagtgtgacgttgtcaggcacg
ggacaagggaaaatttctggtggggctgcagtgtctggcagttccagtgcctccatgaat
gtgtgtatgctgcgtgtgactcagcagacctgggagatcatgcaacgtgaaaggcacctg
cagcagcctgaaaacaaaatcctgcaacagctgcggaatcgtggggatgacgtgtttgtg
gtgaccgaggtgctgcagacaaaggaggaggtgcagatcacccaggtccacagccacgag
ggctcaggccagttcacactgcctggagcctcgtgcttgcagggtgaaggcaagggccac
caaagccggaagaagatggtgaccattcctgcaggcagcatccttgcattccgagtggcc
cagctgctcattggctctgaatgggatattcttctcatctcaaatgagaaaaagaggacc
tttgagctgccctcctcaggccacaaaggagcagtgggccagaggcggcatgactttagt
ctgcttgccgtactccattccatcggggagcggctgagtctcaagtcagatggaaccaat
gaggaagaagtaatcagggaagacttccaaggcctgcgtgcggaggtggaggcaggctct
tcagaactgcggagcttagaaatggagttgagacaacagctactagtagacatcgggagg
attttacaggaccagcccagcatggaagccttagaggcctcactagagcagggtctgtgc
agtggtgagcaggtagagcctctggaaggcccagcaggcagcatccttgagtgtctggtg
ctcgactctggagaactggtgccggaacttgcagcccccgtcttctacctgttgggagca
ctggctgggttgagtgaaacccagcagcagctactggctactaaggctctggaggcaacg
gtgctgtcaaaggagctagagttggtgaagcacgtcttggaacagagcaccccatggcag
gagcagagatctgtgcccctgccctccaggctccttggggacagctgggatgaggaggct
ctcacctgggtcttgctagaagaatgtggcctaacgctgcaggtggaacccccccaggta
tactgggaaccaacatctcagggccccatatgtgcactctatgcctccctggccctattg
tcaagtctaggccagaaatcgtgttag

  All links  
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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