KEGG   Rattus norvegicus (rat): 315084
Entry
315084            CDS       T01003                                 

Gene name
Gsdmd
Definition
(RefSeq) gasdermin-D
  KO
K20917  gasdermin-D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno04621  NOD-like receptor signaling pathway
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    315084 (Gsdmd)
   04621 NOD-like receptor signaling pathway
    315084 (Gsdmd)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    315084 (Gsdmd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    315084 (Gsdmd)
Transporters [BR:rno02000]
 Other transporters
  Pores ion channels [TC:1]
   315084 (Gsdmd)
SSDB
Motif
Pfam: Gasdermin Gasdermin_C
Other DBs
NCBI-GeneID: 315084
NCBI-ProteinID: NP_001124025
RGD: 1307261
Ensembl: ENSRNOG00000007728
Vega: OTTRNOG00000000275
Position
7
AA seq 451 aa
MPSAFAGVVKNVIKEVGGSGGELIPVDCLRNSTSFKPYCLLSRKLSSSWFWKPRYTCVNL
SIKDILEPSAPEPVSGSSSASMNVCMLRVTQQTWEIMQRERHLQQPENKILQQLRNRGDD
VFVVTEVLQTKEEVQITQVHSHEGSGQFTLPGASCLQGEGKGHQSRKKMVTIPAGSILAF
RVAQLLIGSEWDILLISNEKKRTFELPSSGHKGAVGQRRHDFSLLAVLHSIGERLSLKSD
GTNEEEVIREDFQGLRAEVEAGSSELRSLEMELRQQLLVDIGRILQDQPSMEALEASLEQ
GLCSGEQVEPLEGPAGSILECLVLDSGELVPELAAPVFYLLGALAGLSETQQQLLATKAL
EATVLSKELELVKHVLEQSTPWQEQRSVPLPSRLLGDSWDEEALTWVLLEECGLTLQVEP
PQVYWEPTSQGPICALYASLALLSSLGQKSC
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgccgtcagcctttgcgggagtggtcaagaatgtgatcaaagaggtgggcggcagcgga
ggagagctcatcccagtggactgccttcggaattctaccagcttcaagccctactgcctc
ctgagcaggaaactctcaagctcatggttctggaaaccccgttatacatgtgtcaacctg
tcaatcaaggacatcctggagcccagtgctccagaaccagtgtctggcagttccagtgcc
tccatgaatgtgtgtatgctgcgtgtgactcagcagacctgggagatcatgcaacgtgaa
aggcacctgcagcagcctgaaaacaaaatcctgcaacagctgcggaatcgtggggatgac
gtgtttgtggtgaccgaggtgctgcagacaaaggaggaggtgcagatcacccaggtccac
agccacgagggctcaggccagttcacactgcctggagcctcgtgcttgcagggtgaaggc
aagggccaccaaagccggaagaagatggtgaccattcctgcaggcagcatccttgcattc
cgagtggcccagctgctcattggctctgaatgggatattcttctcatctcaaatgagaaa
aagaggacctttgagctgccctcctcaggccacaaaggagcagtgggccagaggcggcat
gactttagtctgcttgccgtactccattccatcggggagcggctgagtctcaagtcagat
ggaaccaatgaggaagaagtaatcagggaagacttccaaggcctgcgtgcggaggtggag
gcaggctcttcagaactgcggagcttagaaatggagttgagacaacagctactagtagac
atcgggaggattttacaggaccagcccagcatggaagccttagaggcctcactagagcag
ggtctgtgcagtggtgagcaggtagagcctctggaaggcccagcaggcagcatccttgag
tgtctggtgctcgactctggagaactggtgccggaacttgcagcccccgtcttctacctg
ttgggagcactggctgggttgagtgaaacccagcagcagctactggctactaaggctctg
gaggcaacggtgctgtcaaaggagctagagttggtgaagcacgtcttggaacagagcacc
ccatggcaggagcagagatctgtgcccctgccctccaggctccttggggacagctgggat
gaggaggctctcacctgggtcttgctagaagaatgtggcctaacgctgcaggtggaaccc
ccccaggtatactgggaaccaacatctcagggccccatatgtgcactctatgcctccctg
gccctattgtcaagtctaggccagaaatcgtgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system