KEGG   Rattus norvegicus (rat): 315250
Entry
315250            CDS       T01003                                 
Symbol
Pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    315250 (Pdzrn4)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     315250 (Pdzrn4)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    315250 (Pdzrn4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 315250
NCBI-ProteinID: NP_001101577
RGD: 1308860
Ensembl: ENSRNOG00000022844
UniProt: D3ZNV5
Position
7:125696448..125844965
AA seq 775 aa
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRTAKEPIVVQVLRRTPLSR
PPYGMAPEVQLMNASTQTDITFEHIMALAKLRPLTPPVPDTCPFLLSDSCHSLHPMERAF
YEDHEYVSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDIQNREEAVALLSSDECKRIVLLIARPDLQLDEGWLEDE
RNEFLEELNSEMLEEERNEGAQCTANELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRT
DESLRNDESSEQENVVEEPHSTALKSKRELGQSQDTLGSIELQCNQSCAGGECLDSDCAS
NQEVCEGFQQLLELKIRNHGDYDLYYSSSTLECNQGEQDGVEHELKLLNEELRNIELECQ
NIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSLDMQRGKLDDIIEHPEKSDKDSSSAYNT
AESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPSRPSTREYTATKVKTTHEG
CSVESLEKSLENSQLLDQEHTVSEHTPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKS
AVEYAQSQLSLVSMCKESPRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEE
RSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEG
KKELSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgggctgcaacttgtgcacttttcagaaaagagaggaacactacaaactgctgtacgaa
gtttcccaggtcaatggcaaggatctctcgaaggccacccatgaagaggcagtggaagct
ttccgaaccgccaaggagcccatagtggtacaggtgttaaggcggactcccctcagccga
ccaccatacggcatggccccggaagtacagctcatgaatgccagcacacagacagacatc
acttttgaacacattatggccctggcaaagcttcgaccactcacccctccggtgccagac
acctgtccgtttttgctttcagacagctgtcattccctgcatccgatggagcgtgcattt
tatgaagaccatgagtacgtttccagcttgcccgctgatgcagacagagcagaagacttt
gaatacgaggaagtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgctaccgaaccgatgatgaagaagacacaggcatttatgtcagcgaggttgacccaaat
agcattgctgccaaggatggtcgcattcgagaaggggatcgtattttacaaataaacggg
gaagacatccagaaccgggaagaggccgtggctctgctctcgagtgatgagtgtaagaga
attgtgctgctcatcgccaggcccgatttgcagctggatgaaggctggctggaagatgaa
aggaacgaattcttagaggagttaaactcagagatgctggaggaagagcgtaatgaagga
gcgcagtgcacagccaatgagctgcagcagccaaaaaagcaggaggaagaagaaggcaca
acagacacggccacatcctcgtccaacaaccaggagaaggacagtggcgtggggcgcaca
gatgagagcttgcgaaatgatgagagctcagagcaggagaatgtggtcgaggagccccac
agcacagcactgaagagcaagagagagctggggcagagccaagacaccctaggaagcatt
gagcttcagtgcaaccagagctgcgctgggggtgagtgtttggactccgactgtgccagc
aaccaggaggtgtgtgaaggattccagcagctattggagcttaagatccgaaaccatgga
gattatgacctgtactactcaagcagtacgctcgaatgcaatcaaggggagcaggacggg
gtggagcatgaactgaagctgttaaatgaggagctacgaaacattgagctggagtgtcag
aatatcatgcaggcccacaggctccagaaagtgacggaccaatacggagacatctgggca
ttgcatgatggaggattccgaaattacaacaccagcctagatatgcaaagagggaaactg
gacgacatcatagagcatccggaaaagtcagacaaggacagctcaagtgcatacaataca
gctgagagctgcagaagcaccccactgactgtagacaggtccccggacagttcccttcca
agaatgatcaacctcaccaataagaaaaatctgaggagcatgatgacagcccatcagtcc
ccttccagaccgagcaccagggaatacaccgctaccaaagtcaaaaccacccatgaaggt
tgcagcgtcgaaagcctggagaagagtctagaaaacagccagcttctggatcaggagcac
acagtcagtgagcatactccatacctctctccttaccacagctcctcctacagatatgcc
aacattccggcgcatgcccggcactatcaaagctacatgcagctaattcaacagaaatct
gccgtagagtatgcccagagtcagctcagcctggtgagcatgtgcaaggaatcgccgagg
ggctcagagcccaagatggaatggaaggtaaaaattagaagtgatgggacccggtacata
accaagaggccagtgcgagaccgacttctgaaggaacgtgccttaaagatcaaggaggag
cggagcggcatgaccacagatgacgacaccatgagtgagatgaaaatggggcgctactgg
agcaaggaggagagaaagcaacacctggtccgggccaaggagcaaaggcggcgccgggag
ttcatgatgcggagtcggctggagagcctcaaggagagcccacagagcagcggcgagggc
aagaaggagctgagcatcattgaactgagccacaagaagatgatgaagaaaagaaacaag
aaaattttggataactggatgacaatccaagaactgatgacccatggggccaaatccccg
gatggcacaagggtccacaatgcctttctgtcagtgaccaccgtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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