KEGG T01003: 315728

Rattus norvegicus (rat): 315728

Entry

315728            CDS       T01003

Symbol

Thsd4

Name

(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1

K23377

thrombospondin type-1 domain-containing protein 4

Organism

rno Rattus norvegicus (rat)

Pathway

rno04350

TGF-beta signaling pathway

Brite

KEGG Orthology (KO) [BR:rno00001]
09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    315728 (Thsd4)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    315728 (Thsd4)
Domain-containing proteins not elsewhere classified [BR:rno04990]
Thrombospondin domain-containing proteins
  ADAMTS-like proteins
   315728 (Thsd4)

SSDB

Motif

Pfam:

TSP1_ADAMTS ADAMTS_spacer1 TSP_1 ADAMTS_CR_3 TSP1_CCN PLAC TSP1_spondin

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

Position

8:complement(69280397..69880144)

AA seq 1017 aa
MVSHLTSCLSALGALLLLGSQLVCPQPSTEHRKVPQRMAVAEGTPEDSGGGSPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPSSYRAPAGSRPSGPTLSITGHVVSAVRTSVPLHRSHEE
QRTLAGSSASRQGPTVVRGSRHPQARSREPSERRSRTRGPIGPGKYGYGKAPYILPLQTD
TTHTPQRLRRQRPSSRPSRSQEASASKQGYRPPTHHFSHNRPLYQSDSGPRSGLPPSEAS
IYQLPLTHDQNYPAASSLFHSPELSSNNGARPHGTSQAFSQHLRSTAISCIGAYRQYKLC
NTNACPDSGRSIREVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQATGYRFYVRQA
ERVIDGTPCDQNGTAICVSGQCKSIGCDDFLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGNNAISPQVPPHR
RPGEPFNGQLETEDGGQEDREEREKNQEKEDSHVEAPEVFTSESTQTFPVRHPERFPSHR
PDNLVPPAPQHPRRNRDHNWKQLGTTECSTTCGKGSQYPIFRCVHRNTHEEVPESYCDSS
MKPTPEEEPCNLFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQTRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHISSLPLEGCGNNRPAE
ATPCDNGPCTGKVEWFTGSWSQCSVECGSGTQQREVICVRKNADTFEVLDPYECSFLEKP
PSQQACHLKPCGAKWFSTEWSMCSKSCQGGFRVREVRCLSDDMTPGSLCDPQLKPEERES
CNPQDCVPEVDENCKDKYYNCNVVVQARLCVYNYYKTACCASCTRVANRHTGFLGSR

NT seq 3054 nt +upstreamnt +downstreamnt
atggtttcccatcttacaagctgtctcagtgccctgggcgccctcctgctgcttggttct
cagcttgtctgcccgcagccctccactgaacacagaaaggtcccacaacggatggcagtg
gccgagggaaccccagaggatagtggtggcggctccccaggtgtgtggggctcctggggc
ccctggtctgcctgttcacgcagctgcagcggtggtgtgatggagcagacacggccctgc
cttcccagctcctaccgcgcaccagcaggctcccggcccagtggccctacactgtccatc
actggccacgttgtgtcagctgtacggacctcagtaccactgcatcgaagccacgaagag
cagcgtaccctggctggctccagtgccagccgccaaggccccacggtggtgcgaggcagc
cgacaccctcaggcccggagccgtgaaccttcagagagaaggagcaggacccgaggtccc
attggccctggcaagtatggctatgggaaggctccctacatcttaccactgcagacggat
accacacatactccacagaggcttcggagacaaaggccttcatccagaccctccaggtcc
caggaggcatctgcttctaagcagggctacaggccaccaacccaccacttctctcacaac
agacctctctaccagagtgacagtggccctcgttctggactgccaccttccgaggcctct
atctaccagctgcccttgactcacgatcaaaactaccctgcagcttcaagtctcttccac
agcccggaattgagcagcaacaatggtgctaggccccacgggacatctcaggccttctct
cagcatctgcgatcaacagcaatctcctgcatcggggcctatcggcagtacaaactgtgc
aacaccaatgcatgtccagacagtggtaggagtatccgggaggtacagtgtgcgtcctac
aacaacaagccattcatgggccgcttttatgaatgggaaccgtttgcagaagtaaagggt
aatcgaaaatgtgagctgaactgccaggcaaccggctaccgcttctacgtccgacaggct
gagagggtcattgacggcacaccctgtgaccagaacggcacggcaatctgcgtgtcgggg
cagtgcaagagcatcggctgtgatgacttcctgggatctgacaaagtcgtggacaagtgt
ggggtgtgcggcggtgataacacgggctgccaggtggtgtcaggcgtgtttaagcatgcc
ctcaccagcctgggctaccaccgggttgtagagattccccaaggagccacaaaaattaac
attacggaaatgcacaagagcaacaactacttggccttgcgaagtcgctctggccgctcc
atcatcaatgggaactgggcaatcgatcgccccgggaagtacgagggcggagggacaatg
ttcacctacaagcgaccgaacgagatctccagcactgccggggagtcctttttggctgaa
ggtcccactaatgagatcctggatgtctatatgatacaccagcagcccaacccaggagtc
cactatgagtacgtgatcatggggaataatgccatcagtccacaggtgccaccacacagg
agaccgggagaacctttcaatgggcagttggaaacagaagatggcggtcaggaggacaga
gaagagagggagaagaaccaggagaaggaagactcacacgtcgaggcccctgaagtattc
acatcagaatccacgcagaccttcccagtcaggcatccggagagattcccttcccaccga
ccagataacttagtgcctccagcaccacagcaccccaggcgaaaccgggaccacaactgg
aagcagctggggacaacagaatgctccaccacctgtgggaaaggatcacagtaccctatc
ttccgctgtgtgcacagaaacacacacgaggaggttcccgagagctactgtgactccagc
atgaagccgaccccagaggaggagccctgcaacctcttcccctgcccagccttctgggac
atcggggagtggtctgaatgcagcaagacctgtggcctgggcatgcagcaccgccaggtc
ctgtgccgccaggtgtatgccaaccgtagcctgacggtgcaaccctaccgctgccagcac
ctggagaagccagagaccaccagcacctgccagctcaagatctgcagcgagtggcagact
cggactgactggacctcgtgctcagtgccctgtggcgtgggacagaggacccgggacgta
aagtgcgtgagcaacattggggacgtagtggacgacgaggagtgcaacatgaagctccga
ccaaatgacatcgaaaactgtgacatgggaccctgtgcaaagagctggttcctcactgaa
tggagcgaaaggtgctcagcagagtgtggggctggggtgaggacacgctcggtggtgtgt
atgaccaaccacatcagcagcctgccattagaaggctgtgggaacaacaggccagcggag
gctacaccatgtgacaatgggccctgcacaggcaaggtggagtggttcactggcagctgg
agtcagtgttccgtcgagtgtggcagtgggacacagcagagggaggtgatctgcgttagg
aagaatgcagacacctttgaagtgctcgacccttatgagtgttcattcctggagaagccc
ccaagccagcaggcctgtcacctcaagccttgtggtgctaagtggttcagcacagaatgg
agcatgtgttccaagagctgtcagggcggattccgggtgcgggaagttcggtgtctctca
gacgacatgaccccgggtagcctctgcgacccccagttgaagccagaagagagagaatct
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggacaagtactacaac
tgcaatgtggtggtccaggcgcgcctctgtgtctacaactactacaagactgcctgctgc
gcctcttgcacccgagtggccaacagacacacaggctttctggggagccgataa

All links

Gene (22)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

Download RDF

DBGET integrated database retrieval system