KEGG   Rattus norvegicus (rat): 317204
Entry
317204            CDS       T01003                                 
Symbol
Pcdh11x
Name
(RefSeq) protocadherin-11 X-linked precursor
  KO
K16498  protocadherin delta 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    317204 (Pcdh11x)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    317204 (Pcdh11x)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     317204 (Pcdh11x)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   317204 (Pcdh11x)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 EphA2_TM
Other DBs
NCBI-GeneID: 317204
NCBI-ProteinID: NP_001258157
RGD: 1562864
Ensembl: ENSRNOG00000069840
UniProt: A0A8I6AKA9
Position
X:90279191..90974671
AA seq 1338 aa
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIK
SQNVFGLDVVETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNNAKRLF
HLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPAKAMVLVNVTDINDNVPSIDIRYI
VNPTNGTVLLSENAPLNTKIALITVTDKDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS
PGAQLTKISATDADSGRNAEINYLLGFDAPPEFNLDRRTGILTAVKKLDREKQEKYYFTV
LAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPKHGTVGLITVTDPDYG
ENSAVTLSVLDVNDQFTIDPQSGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPIFIDPPSNYSFEWVLPSTDPGTVIFKVLAIDNDTGMNAELRYSIVGGNT
KGLFMIEQISGNITLKEKCMVSDIGLHRVIVKAKDLGQPDSLFNVVNVNLFVNESVPNTT
LIYEMVRKSIDSPANQNSETTSASSPTTDYVKIMVAIVAGTITVVLVIFITAVVRCRQSP
HLKASQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHPPKNLLLNFVSIEEAKPDDADNE
RNSVTLDLPIELEDQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPPMKEVVRS
HTPMKEATTVEIWTHPHPQRRSDGKKAGKSQRRVTFHLPEGSQESISDGGLGDHDPGSLP
STSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDTC
TQECLILGHSDSCWMPASLTNPTPSQIKTSAICHSPPRTHSSVRRCSPPVTQTVAICHSP
PVTQAIALCHSPPPVQATVLRHSSPPAQASAVCYSPTLVQAVVIHRSPPLPQAATLRHTQ
AQPPMGLQQGWVQGAGADGTHPIDQGVQGSTRAQFYTMAERLHPDDDSIKVIPLTTFTSG
KQARASRGDSPIMEEHPL
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaattatacagtccgagaagaaatgccagaaaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgcttattcccgacaagtccttaaccacgcct
atgcaattcaaattagtttacaaaaccggggatgtaccattgattcggattgaagagggt
actggcgagatcttcactactggcgcacgcattgatcgtgagaaattatgtgctggaatc
gtgttggatgctcgttgcttttacgaagtggaggttgctgttttgccggatgaaatattt
agattggttaagatacgctttctgatagaagacataaatgataatgcaccgttattcccg
acaactgtcatcaacatatcaattccagaaaactcggctataaactctcgatattctctt
ccggcagccattgatcctgacattggaataaatggagtccaaaattaccaactaattaag
agtcaaaatgttttcggtcttgatgtcgttgaaacaccagaaggagaaaagatgccccag
ctgatcgttcaaaaggaattagatagagaagaaaaggatacctatgtgatgaaagtaaaa
gttgaagatggtggctttcctcaaagatccagtacagctattttgcaagtaagtgttgct
gatacaaacgacaaccgcccaatcttcatagagaaggaaattgaagtcagtataccagaa
aatgctcctataggttcttcagtgacacaactccatgccacagatgctgatataggtgaa
aacgccagaattcacttttatttcagcaatctagtctccaataacgctaagagactgttt
catcttaacaccactaccgggcttatcactgtcaaagaaccactggatagggaagaatca
ccaagccacaagttattggttttggcaactgatggtggatcgacaccagcaaaagcaatg
gtgctggtaaatgttacagatatcaatgataatgtaccatcaattgacataagatacatc
gtcaatccaaccaatggcactgtgctcctttcagagaatgctccgcttaacactaaaatt
gctctcataactgtgacggataaggattctgaacataatggtagggtgacatgcttcaca
gatcatgaagttcctttcagattacgtccagtattcagtaatcagtttctcttggagaca
gctgcatttcttgactttgagtccaccagagaatatgccattaaattactggccgctgat
gctggcaaacctcctttgaatcagtcatccatgctcctgatcaaagtaaaagatgaaaat
gacaatgctccggttttcacccaatctttcataagcctttccgttcctgagaataactct
cctggtgcacagttgacaaaaatcagtgcaacagatgcagacagtggacgcaatgctgaa
ataaactacctgctaggttttgatgcaccacctgaattcaacctggatcgtcgtacaggc
atcctgactgcagtgaagaaactagatagagaaaaacaggaaaagtattactttacagtc
ctggcacaggacaatggaattccacccttaatgtccaatgccactgtgttcgtgactgtt
cttgaccagaatgataacagcccaattttcactcataatgaatataacttctatgttcct
gaaaaccttccaaaacatggcacagtagggctaataactgtgactgatcctgattatggg
gagaattctgcagttactctctctgtcttagatgtaaacgatcaattcactattgatcca
cagtctggtgtcatcaggccaaatatttcatttgacagagaaaaacaagaatcctatact
ttctatgtaaaagctgaggatggtggtagggtatcacgttcttcaactgctaaagtaacc
ataaatgtggttgacgtaaatgataacaaaccaatttttattgaccctccttccaattac
tcctttgaatgggttctaccatccacagatcctggcacagtcatcttcaaggttcttgca
attgacaatgatactggcatgaatgcagagcttcgttacagcattgttggaggaaacaca
aaaggactgtttatgattgaacaaatatcaggcaacatcacattgaaggagaagtgcatg
gtttcagatattggtttacatcgagtcatagtcaaggctaaagatttaggacaacctgat
tctctcttcaatgttgtaaatgtcaatctctttgtaaatgagtctgtgcccaatactacc
ctgatttatgaaatggtgcgcaaaagcattgactcacctgcaaatcaaaattctgaaaca
acaagtgcatcctcaccaaccaccgactatgtcaagatcatggttgccattgttgctggc
accataactgttgtcctagttattttcatcactgctgtagtaagatgccgccaatcacca
caccttaaggcttctcagaaaaacaaacagaattctgagtgggttactccaaacccagaa
aacagacagatgatcatgatgaagaagaagaagaagaaaaagaagaagcatccccccaag
aacctgctgcttaattttgttagtattgaagaagcaaagccagatgatgctgacaatgag
agaaacagtgttacactagatcttcctattgagctggaggatcaaaccatgggcaaatac
aactggggcactacacctactaccttcaagcccgatagccctgatttggctcgacactac
aaatctgcctctccccagcctgcattccagatccagcctgaaacacccctaaactcaaag
caccacatcattcaggagcttcctcttgataataccttcgttgggtgtgattccatctcc
aagtgctcctccagcagttctgatccctacagtgtttctgagtgcagctatccagtgaca
actttcaagactcctgtgtctgtgcataccagacctccaatgaaggaagtcgtacgatct
cacacacctatgaaagaggcaacaactgtggaaatctggactcatccgcacccacagcgg
agatctgatggaaaaaaggcaggaaagtcccagagacgtgttacatttcacctaccagaa
ggctctcaggaaagcatcagtgatggtggattgggagaccatgatccaggcagccttccc
agtacatcccatgcactgccacttggctatccacaggaagagtattttgatcatgctgca
ccaaacaaccgcactgaaggggatggcaactctgatcctgaatctactttcattcctgga
ctaaagaaagctgcagaaataacagtgcagccaactgtggaagaagcctctgacacctgc
actcaagaatgcctcatcctgggccactctgactcctgctggatgccagcttcgctgacc
aatcctactccttcacagataaagacttctgctatctgccacagtccacccaggacccat
tcatcagttcgtcgctgcagccctccagtgacacagactgttgctatctgccacagtcct
cctgtgacccaggctattgccctgtgccacagccctccaccagtacaggctaccgtactc
cgtcatagctcaccaccagcacaggcctctgcagtctgctacagcccaactctggtacag
gctgtggtaattcaccgcagtcctcctctgccacaggctgccacactccgtcacactcag
gcacaaccaccaatgggtttacagcaaggatgggtgcagggtgcaggagcagatggaaca
catcctattgatcagggagtacagggtagtacgagagctcagttttacaccatggctgaa
agacttcatccagatgatgactcaattaaagtcattcctttgaccacctttacttcaggt
aaacaggccagagcctcaagaggtgattctcccatcatggaggaacatcccttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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