KEGG   Rattus norvegicus (rat): 317256
Entry
317256            CDS       T01003                                 
Symbol
Taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    317256 (Taf1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rno01001]
    317256 (Taf1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    317256 (Taf1)
   03036 Chromosome and associated proteins [BR:rno03036]
    317256 (Taf1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     317256 (Taf1)
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     317256 (Taf1)
Protein kinases [BR:rno01001]
 Serine/threonine kinases: Other
  TAF1 family
   317256 (Taf1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     317256 (Taf1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    317256 (Taf1)
SSDB
Motif
Pfam: DUF3591 Bromodomain TBP-binding zf-CCHC_6 Cac1_C Opi1
Other DBs
NCBI-GeneID: 317256
NCBI-ProteinID: NP_001178652
RGD: 1562050
Ensembl: ENSRNOG00000002565
UniProt: A0A8I6A7M0
Position
X:70680901..70756535
AA seq 1893 aa
MGPGWAGLLPEDGSGSPSAVMSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDD
ECKKHLAGLGALGLGSLITELTANEELSGTDGTLVNDEGWIRSREDAVDYSDINEVAEDE
SRRYQQTMGSLQPLCHTDYDEDDYDADCEDIDCKLMPPPPPPPGPVKKERDQDGITGVSE
DGEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEATQSESKDGKLTLPLAGIMQHDA
TKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEEE
CSVELEVNQKSLWNYDYAPPPLPEQCLSDDEITMMAPVESKFSQSTGDTDKVMDTKPRVA
EWRYGPARLWYDMLGVPEDGSGFDYGFKMKKTEHDSTMKYNIMKKLRKLEENNGVDLLAD
ENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFTATLD
DDKPWYSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE
ATSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQG
LRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPL
LKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATK
IKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPE
SDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSK
DRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAM
VSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFI
AAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLS
LKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQ
ERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSR
EREEQERKELQRMLLAAGSAAGGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEY
VRCETVRKAAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQE
KEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQ
EEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVG
TTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYK
IITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDE
KLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPD
YYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNV
CHQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQAKPPDLYDNSTSLS
VSRDASVYQDESNLSVLDIPSATSEKQLTQEGGDGDGDLADEEEGTVQQPQASVLYEDLL
MSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVESGSIRPKQPRMLQENTRMGMENEE
SMMSYEGDGGEASRGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEQRS
GPSVLSQVQLSEDEEDSEDLHSIAGDSDLDSDE
NT seq 5682 nt   +upstreamnt  +downstreamnt
atggggccagggtgggctggactgctgcccgaagacggttctggtagcccttccgccgtc
atgtcagacacagacagcgatgaagattctgctggtggaggcccgttttctttgactggg
ttcctgttcggcaacataaatggagcagggcagctggagggtgaaagcgtcttggacgat
gagtgcaagaagcatcttgcaggcttgggggcattgggccttggtagcctgatcactgaa
ctcacagcaaatgaagaattgtctgggactgatggtaccctggtaaatgatgaaggatgg
attaggagtagagaagatgctgtggactactcagacatcaacgaggtggcagaagatgaa
agtcgaagatatcagcagacaatggggagcttgcaacccctttgccacacagattatgat
gaagatgactatgatgctgattgtgaagatattgattgcaaattgatgcctcccccacct
ccacccccaggaccagtgaagaaagagagggaccaagatggtattactggtgtgtctgaa
gatggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaa
gtggacttcagtagttcctctgactcagaatctgagatgggacctcaggaagcaacacag
tcagaatctaaggatggaaagctgaccctaccattggctgggattatgcagcatgatgcc
accaagctgttgccaagtgtcacagaactttttccagaatttagacctggaaaggtgtta
cgctttttacggctttttggaccagggaagaatgtcccatctgtttggaggagtgctcgg
agaaagaggaaaaagaagcaccgtgaacttatacaggaagagcagatccaggaagaggag
tgttcagtagaattagaagtcaaccagaaatctctgtggaactatgactatgctccacca
ccacttccagagcagtgtctctctgatgatgaaatcacaatgatggctcctgtggagtcc
aagttttcccagtcaactggagatacagataaagtaatggataccaaaccaagagtggca
gaatggcgttatggacctgcccggctatggtatgatatgctaggtgttcctgaagatggc
agtggctttgactatggcttcaaaatgaagaagactgaacatgactctacaatgaaatat
aacataatgaagaaactaagaaaacttgaggaaaacaatggcgttgatcttctggcagat
gaaaacttcctaatggtgacacaactgcattgggaagatgatatcatctgggatggggag
gatgtcaaacacaaaggaacaaaacctcagcgtgcaagtttggcaggttggcttccctcc
agtatgactaggaatgccatggcctacaatgttcagcaaggttttacagctacattggat
gatgataaaccatggtactccattttccccattgataatgaagatctggtatatggacgt
tgggaggacaatatcatttgggatgctcagaacatgcctaggattttggagcctcctgtt
ttgacacttgatcccaatgatgagaacttgattttggagatccccgatgagaaggaagaa
gctacttctaattccccttctaaggagaataagaaagaatcatctctgaagaagagtcga
attctcttgggaaaaacaggagttatcaaggaagagccacagcagaacatgtctcagcca
gaagtgaaagatccatggaatctctccaatgatgagtattactatcccaagcaacagggt
cttcgaggtactttcggagggaatattatccagcactcaattccagctgtagaattacgg
cagcccttctttcccacccacatgggacccatcaaactccggcagttccatcgcccacct
ctaaaaaagtactcctttggggcactatctcagccaggcccacactcagtccagcctttg
ttgaagcatatcaaaaagaaggccaagatgagagaacaagagagacaagcctcgggtggt
ggagagatgttttttatgcgtacacctcaggaccttacaggcaaagatggagaccttatt
cttgctgaatacagtgaagaaaatggaccattaatgatgcaagttggcatggcaactaag
ataaaaaactactataaacggaaacctggaaaagatcctggagccccagattgcaaatat
ggagaaactgtttattgtcatacatcacctttcctgggttctcttcatcctggccagtta
ctgcaggcatttgaaaacaacctttttcgtgctccaatttatcttcataagatgccagag
tctgacttcctgatcattcgcacaaggcagggttactatattcgagaattggtggatatt
tttgttgtgggccagcagtgtcccttgtttgaagttcctggtcctaattccaaaagggcc
aatacacacatcagagactttctgcaggtttttatttaccggctcttttggaagagtaaa
gataggccacggaggatacggatggaagatataaagaaagcctttccttcacattcagaa
agcagcatccggaagaggctaaagctctgtgctgacttcaaacgtacagggatggattca
aactggtgggtgctgaagtctgattttcgtttaccaacggaagaggagatcagagctatg
gtctctccagaacagtgctgtgcttattatagcatgatagctgcagaacagagactaaag
gatgctggctatggagagaagtccttttttgctcctgaggaagaaaatgaagaagatttc
cagatgaagattgatgatgaagttcgtactgctccttggaatactacaagggctttcatt
gctgccatgaagggcaaatgtctcctggaggtgactggagtagcagatcctacaggttgt
ggtgaagggttctcctatgtgaagattccaaacaaaccaacacagcagaaggatgataag
gagcctcagccagtgaagaaaacagtcacaggaacagatgcagaccttcgtcgcctatct
ttgaaaaatgccaagcaacttcttcgtaaatttggtgtgcctgaggaagagattaaaaag
ttgtcccgctgggaagttattgatgtggtacgcacaatgtcaacagaacaggctcgttcc
ggagaggggcccatgagtaaatttgctcgtggatcaaggttttctgtggctgagcatcaa
gaacgttacaaagaggaatgtcagcgcatctttgacctacagaacaaggttttgtcttca
acagaggtcttatcaactgacacagacagcagctcagctgaagacagtgactttgaagaa
atgggaaaaaacattgagaatatgctgcagaacaagaaaacaagctctcagctgtccagg
gaacgggaggagcaggaacgaaaggaactccagcggatgctactggcagcaggctcggca
gcaggaggaaacaaccacagagatgatgacacagcctcggtgactagccttaactcttct
gccactggccgctgtctcaagatttatcgaacatttcgagatgaggaggggaaggaatat
gttcgttgtgagacagtccgaaaagcagctgttattgatgcttatgtacgcatacggacc
acaaaagatgaagaattcattcgaaaatttgccctttttgatgagcaacaccgagaagag
atgagaaaagaacggcggaggattcaggagcaactgaggagacttaaacgaaaccaggaa
aaggagaaactgaagggtcctcctgagaaaaagcccaaaaagatgaaggaacgtcctgac
ttaaaactaaaatgtggagcatgtggtgcaattggacacatgaggacaaataaattctgc
cctctttattatcaaacaaatgcaccaccttctaatcctgttgcaatgacagaggaacag
gaagaagagctggaaaagacagtcattcacaatgataatgaagaacttatcaaggtcgaa
gggaccaagatcgttttgggaaaacagctaattgagagtgcggatgaagtacgcagaaaa
tctctggttctgaagttccctaaacaacaacttcctcccaagaaaaagcgtcgggttgga
accactgttcactgtgactatttgaatagacctcataaatccatccaccgacgccggaca
gaccctatggtgacactgtcttctatcttggaatctattatcaatgacatgagagatctt
ccaaatacataccctttccatactccagttaatgcaaaagttgtaaaggattactacaaa
atcatcactcggccaatggatctacaaacactccgtgaaaatgtgcgcaaacgtctttat
ccatctcgagaagaattcagagaacatttggaattaattgtgaaaaatagtgcaacttat
aatgggccaaaacattcactgactcagatttctcaatccatgctggatctctgtgatgaa
aaactcaaagagaaagaggataagttggcacgtttagagaaagctatcaaccccttgctt
gatgatgatgatcaagtagcattttcttttattctggataacattgtcactcagaaaatg
atggcagttccagattcttggccatttcatcacccagttaataagaagtttgttccagat
tattacaaagtgattgtcaatccaatggatttggagactatacgtaagaatatctccaag
cacaaataccagagtcgagagagctttttagatgatgtaaacctgattctggccaacagt
gttaagtacaatgggcctgagagtcagtatactaagactgctcaggagattgtgaacgtt
tgtcaccagacattaactgagtatgatgaacatttgactcaacttgagaaagatatttgt
acagctaaagaagcagctctggaggaagcagaattagaaagtctagacccaatgactcca
ggaccttatacccctcaggctaagcctcctgatttatatgataacagcacatccctcagt
gtttctcgagatgcttcggtgtatcaagatgagagcaatctgtctgtcttggatattccc
agtgctacttcagaaaagcagctaacacaggaaggtggagacggagatggtgatcttgca
gatgaagaggaaggaactgtacaacagccccaagccagtgtcctgtatgaggatttgctt
atgtctgaaggtgaagatgatgaagaagatgctgggagtgatgaagaaggagataaccct
ttctctgctattcagctaagtgaaagtggaagtgactctgatgtggaatctggcagcata
agacccaaacagccccgcatgcttcaagagaatacaaggatgggcatggaaaatgaagaa
agcatgatgtcctatgagggagatggtggggaggcttcccgtggtttggaggatagcaac
atcagttatgggagctatgaggagcctgatcccaagtcgaacacccaggatacaagcttc
agcagcatcggtgggtatgaggtatcagaggaggaagaagatgaggaagagcagcgctct
gggcccagcgttctaagccaggtccaactctcagaggacgaggaggacagtgaggatctc
cactccattgctggagacagtgacttggactctgatgaatga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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