KEGG   Rattus norvegicus (rat): 361317
Entry
361317            CDS       T01003                                 
Symbol
Rbm27
Name
(RefSeq) RNA-binding protein 27 isoform 2
  KO
K13193  RNA-binding protein 27
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    361317 (Rbm27)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    361317 (Rbm27)
SSDB
Motif
Pfam: PWI RRM_1 zf-CCCH Nup35_RRM zf_CCCH_4 Nup35_RRM_2
Other DBs
NCBI-GeneID: 361317
NCBI-ProteinID: NP_001101899
RGD: 1311966
Ensembl: ENSRNOG00000027250
Position
18:34524523..34587115
AA seq 1005 aa
MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKE
TSGFVDKLFESLYTKNYLPPLEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDVRKKKYPS
PQKSRSESSERRTREKKREDGKWRDYERYYERNELYREKYDWRRGRSKSRSKSRGLSRSR
SRSRGRSKDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTV
TVIAPAHHSENTTESWSNYYNNHSSSNSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGN
DPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS
MRLPVPQGHGQPPPSVVLPIPRPPISQSSLINSRDQPGTSAVPNLAPVGARLPPPLPQNL
LYTVSENTYEPDGYNPEAPSITSSGRSQYRQFFSRAQTQRPNLIGLTSGDMDANPRAANI
VIQTEPPVPVSINSNITRVVLEPESRKRAISGLEGPLTKKPWLGKQGNNNQSKPGFLRKN
QYTNTKLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAI
SSTEAVLNNRFIRVLWHRENNEQPALQSSAQILLQQQHTLSHLSQQHHNLPQHLHPQQVM
VTQSSPSSVHGGIQKMMGKPQTSGAYVLNKVPVKHRLGHATTNQSDTSHLLNQTGGSSGD
DCPVFSTPGHPKTIYSSSNLKAPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEML
EKQIECQKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKT
KTEAQKELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGR
GRGRGRGRGSLNHMVVDHRPKALPAGGFIEEEKEELLQHFSATNQSSKFKDRRLQISWHK
PKVPSISTETEEEEVKEEETETSDLFLHDDDDEDEDEYESRSWRR
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgctcatagaagatgtggatgccctcaagtcctggctggccaagttactggagccgata
tgtgatgctgacccttcagccctagccaactatgttgtagcactggtcaagaaggacaaa
cctgagaaggaattgaaagccttttgtgctgaccaacttgatgtctttttacaaaaagag
acttcaggttttgtggacaaactatttgaaagtctttatactaaaaactaccttccacca
ttggaaccagttaaacctgagccaaaaccactagtccaagaaaaagaagaaattaaagaa
gaggtatttcaagagccagcagaagaagaacgagatgttagaaagaagaaatatcctagt
ccccagaagagtcgttcagaatctagtgagcgaaggacacgtgagaagaaaagagaagat
ggcaagtggagagactatgagcggtactatgagcggaacgagctgtaccgggagaagtat
gactggagaaggggcaggagcaagagcaggagtaagagccgaggcttgagtcggagtaga
agccggagcaggggccgcagcaaagaccgggatccaaataggaacgttgagcacagggaa
agatcaaagtttaagagtgaaagaaatgacctggagagctcttatgtgcctgtgtctgct
ccacctcccaactcttctgagcagtattcctctggggcacagtctattcccagcactgtc
actgtgattgcacctgcgcaccattctgagaacacaaccgagagctggtccaattactat
aacaatcatagctcttccaattcttttggtcgaaacccaccaccaaagagacgctgcaga
gattatgatgaaagaggattttgtgtacttggtgacctttgtcagtttgatcatggaaat
gatcctctagttgttgatgaagttgctctgccaagtatgattcctttcccaccccctcct
cctgggcttcctcctccaccacctcccggaatgttaatgcctccaatgccaggcccaggc
ccaggccctggtcctggccctggccctggtcccggcccaggcccaggccctggccatagt
atgagacttcctgttcctcaaggacatggtcagcctccaccttctgttgtgcttcccata
ccaagacctcccatttcacagtcaagcttaataaacagccgtgaccagcctggaacaagt
gcagtgcccaatcttgcaccagtgggagcaagactacctcctcctttaccccagaacctc
ctttatacagtatcagaaaatacatatgaaccagatggttataatcctgaagcacctagt
atcaccagttctggtagatctcagtacagacagttcttttcaagagcacagacacagcgt
cccaacctgattggcctcacatctggagatatggatgcaaatccaagagctgctaatatt
gtcatccagactgaaccaccagttcctgtttcaattaatagcaacatcaccagagtagtt
ctggaaccagagagccgaaagagagctattagtggtttggaagggccccttacaaagaag
ccttggctgggaaaacaagggaacaacaatcagagtaaaccaggcttcttaaggaagaat
cagtacacaaacaccaaattagaagtgaaaaaaattccccaggaattgaacaacattacc
aagctcaatgaacacttcagcaaatttggaaccatagttaatatccaggttgcttttaaa
ggtgatccagaagcagcactcatccagtaccttaccaatgaggaggccaggaaagccatt
tctagcacagaagctgttttgaacaatcggttcattcgagtcctatggcacagagagaac
aatgagcaaccagcactccagtcctcagcacagattctcctgcagcagcaacataccctg
agtcacctttcacagcagcaccacaacctaccacagcatcttcatccgcagcaggtgatg
gtaacccagtcttccccctcttcagtccacggaggcatccaaaagatgatgggcaaacca
cagacctctggtgcctatgttcttaacaaagtacctgttaaacaccgtcttggacatgca
actactaaccagagtgacacatctcacttgctaaatcagactggtggttcttctggggac
gattgcccggttttttctactccaggccatccaaaaacaatttacagttcctcgaactta
aaggcaccttcaaaactttgttcagggtctaaatctcatgatgttcaagaagtgcttaag
aagaaacaggaagctatgaagttacagcaagacatgaggaaaaagagacaagaaatgttg
gaaaagcagatagaatgccagaagatgctgatctctaaactagaaaaaaacaaaaacatg
aaaccagaagaaagagcaaacataatgaagaccttgaaagaactgggagagaagatctca
caattgaaggatgaattaaaaacatcttctgcagtctccacaccatctaaagtaaagaca
aaaacagaggcccagaaggaattgttggacacagaactggacctccacaagaggctctcc
tcaggagaagatacaacagagttacgcaaaaagctcagtcagttacaagtcgaggctgcc
agattgggtattttacctgtggggcgaggaaagaccatgtcctctcaaggccgaggaaga
ggccggggtcgaggaagagggaggggctcactgaatcacatggtggtggaccaccgcccc
aaagcactcccagctggagggttcattgaggaggaaaaggaggagttgctccagcatttc
tcagctacaaaccaatcgtctaaattcaaagaccgtcggctacagatatcgtggcacaag
cccaaggtaccgtctatatctactgagactgaggaagaagaagtcaaagaagaggaaaca
gaaacctcagatttgtttttgcatgatgatgatgatgaagatgaagatgaatatgagtct
cgttcgtggcgaagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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