KEGG   Rattus norvegicus (rat): 361365
Entry
361365            CDS       T01003                                 

Gene name
Polr2c
Definition
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03020  RNA polymerase
rno05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    361365 (Polr2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    361365 (Polr2c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    361365 (Polr2c)
   03400 DNA repair and recombination proteins [BR:rno03400]
    361365 (Polr2c)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     361365 (Polr2c)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      361365 (Polr2c)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 361365
NCBI-ProteinID: NP_001012491
RGD: 1306935
Ensembl: ENSRNOG00000015720
UniProt: Q5EB90
Position
19
AA seq 275 aa
MPYANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagccaaccgtgcggatcacggaactcactgaagagaacgtcaag
ttcattatcgagaacacggacctggcggtggccaattccattcggagggtcttcatcgca
gaggtgcccataatagccattgactgggttcagattgatgccaactcctcggtccttcat
gatgaattcatcgcgcacaggcttggtttaatccccctcactagtgatgacattgtggac
aagctgcagtactcccgggactgcacatgtgaagagttctgcccagagtgctccgtggag
ttcacgctcgacgtgaggtgcaatgaagaccagacgcgccatgttacctcccgagatctc
atctccaacagcccccgggttatcccggtgacatcccggaaccgggataatgaccccaat
gactatgtggagcaggatgacatccttattgtcaagctgaggaaaggccaggagctgaga
cttcgagcctatgccaagaagggctttggcaaggagcatgccaagtggaaccctactgcg
ggggtagcttttgaatacgatccagacaacgcacttaggcatacagtgtatcccaagcct
gaggaatggccaaagagtgagtactctgagctggatgaggatgagtcacaggctccctat
gaccccaacggcaagccagagaggttttactacaatgtggagtcatgtggctcactgcgc
cctgagaccattgtcctctcagccctgtctgggctaaagaagaagctgagtgatttacag
acccagttaagccatgagatccagagtgacgtgctcaccataaactag

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