KEGG   Rattus norvegicus (rat): 361879
Entry
361879            CDS       T01003                                 
Symbol
Wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform 1
  KO
K23610  WD repeat-containing protein 41
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04140  Autophagy - animal
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    361879 (Wdr41)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    361879 (Wdr41)
   05022 Pathways of neurodegeneration - multiple diseases
    361879 (Wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    361879 (Wdr41)
Membrane trafficking [BR:rno04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    361879 (Wdr41)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_TEP1_C EIF3I WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_SCAP
Other DBs
NCBI-GeneID: 361879
NCBI-ProteinID: NP_001382526
RGD: 1306363
Ensembl: ENSRNOG00000025462
UniProt: B2RYI7
Position
2:27957453..28008573
AA seq 460 aa
MLRWLIGGGREPQGLAEKAALQTIGEDQGQNPYTELLVLKAHRDIVRFLVQLDGYRFASA
GDDGIIVVWNAQTGEKLLELRGHTQKITAVITFLPLDSCEASSQLLLTASADRTVGVWDC
DTGRQIQRVTCFQSTVKCLAVLQRLDVWLSGGSDLGVWSRKLDLLCKTSHLSDTGISALV
EIPGNCVAAAVGRELIIFRLVTPTEELLEWDIIEVKRLLDHQDNILSLANINDTSFVTGS
HVGELIIWDALDWTVQACERTFWSPTPQLDAQQEIKLCQKQNDIPVNHFACDEENVFAAV
GRGLYVYNLQLKRVIACQKTAHDSNILHIDKLPNRQLISCSEDGAVRMWEVREKQQLAAE
PVPTGFFNMWGFGRVNKQANQPVKKQEENVTTCSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYPEST
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgctgcgctggctgatcggaggaggccgcgagccgcagggcctggccgagaaagctgct
ctgcagacaataggagaggaccaaggtcagaacccctacactgaactgctggtactgaag
gctcatcgcgacattgtccgcttcctggtgcagctagacggctacaggtttgcatctgct
ggtgatgatggaattatagttgtgtggaatgcccagacaggagaaaaacttctggaactc
agaggacatactcagaagataacggctgtcattacgttccttcccctagactcttgtgag
gccagcagtcagcttctcttgacagcctctgctgaccggactgtcggtgtttgggactgt
gacaccggccggcaaatccagagggtcacgtgcttccagtctactgtcaagtgcttggct
gtccttcagaggctggacgtctggctctcaggcggaagtgacctgggtgtgtggagccga
aaattagacctgctgtgtaagaccagccacctttctgacacagggatcagtgctttggtt
gaaatccctgggaactgtgtcgctgcagccgttggcagagaattgatcatttttaggctt
gtaacacccacagaagaactgcttgaatgggatattatagaggttaaacgccttctcgat
caccaggacaatatcctgtcattggctaacatcaatgatacaagttttgtcactggctcc
catgttggggagctgatcatctgggatgctctggactggaccgtgcaggcctgtgaacgc
accttctggagcccgacgccacagctggatgcccagcaggaaataaagctctgccaaaag
caaaatgacattcctgtgaatcatttcgcatgcgatgaagagaacgtatttgcagcagtt
ggaagggggttatacgtgtataacctacagttgaaacgtgtgattgcctgccagaaaact
gcacacgattccaacatcctacacatcgacaaacttccaaacaggcagttaatctcgtgc
tcagaagatggcgctgtgcgcatgtgggaggtccgggaaaagcagcagctggcggccgag
ccggtcccaacagggttttttaatatgtggggatttggaagagtaaacaaacaggccaac
cagcctgttaaaaagcaggaagaaaacgtcaccacgtgttccctggagctcatcggagac
ctgatcggacactcatcatcagtggagatgtttctctactttgaggatcacgggctggtg
acctgctctgcagaccacctcattattttgtggaaaaatggagagcgagaatctggacta
cgcagcttgaagttatttcagaagttagaagaaaacggtgacttatacccagaatccact
tga

  All links  
Gene (7)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (22)   
   Pfam (22)   
All databases (39)   

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