KEGG   Rattus norvegicus (rat): 362226Help
Entry
362226            CDS       T01003                                 

Gene name
Sec23b
Definition
(RefSeq) Sec23 homolog B, coat complex II component
  KO
K14006  protein transport protein SEC23
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    362226 (Sec23b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    362226 (Sec23b)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    362226 (Sec23b)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical Gelsolin zf-Sec23_Sec24 APP_E2
Motif
Other DBs
NCBI-GeneID: 362226
NCBI-ProteinID: NP_001264164
RGD: 1310699
Ensembl: ENSRNOG00000008411
UniProt: D3ZCT7
Position
3q41
AA seq 767 aa AA seqDB search
MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVL
CSRPTCKAILNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTIEYM
IQRGARSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSC
EGISKSYVFRGTKDLTAKQIQEMLGLTKSAMPVQQVRPGQPQEQSAVSSRFLQPVHKIDM
NLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGP
GMVVGDELKTPIRSWHDIEKDNARFMKKATKHYEMLANRTATNGHCIDIYACALDQTGLL
EMKCCPNLTGGLMVMGDSFNTSLFKQTFQRIFSKDFNGDFRMAFGATLEVKTSRELKIAG
AIGPCVSLNVKGPCVSENELGVGGTSQWKICGLDPSSTLGIYFEVVNQHNAPIPQGGRGA
IQFVTQYQHSSTQKRIRVTTIARNWADAQSQLRHIEAAFDQEAAAVLMARLGVFRAESEE
GPDVLRWLDRQLIRLCQKFGQYNKEDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFARQDLTQSLIMIQPILYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVI
YLGETIAQWRKAGYQDMPEYENFKHLLQAPLDDAQEILQARFPMPRYINTEHGGSQARFL
LSKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFMDHLKKLAVSSAS
NT seq 2304 nt NT seq  +upstreamnt  +downstreamnt
atggcaacatatctggaattcattcagcagaatgaagaacgagatggtgtgcgtttcagt
tggaatgtgtggccttctagccgacttgaagccacaagaatggttgttcccttggcttgt
ctcctcactcctttaaaagagcgcccagacttacctcctgtacagtatgaacctgtgctt
tgcagtaggcctacctgcaaagctattctcaatccactttgtcaagttgattaccgagca
aaactttgggcctgcaatttctgttttcaaagaaatcagttccccccagcatatgcaggc
atttctgaggtgaaccagcctgctgaattgatgccccagttctccacaatcgagtacatg
atccagagaggtgctcggtcccctctgatctttctctatgtggttgacacgtgtttggaa
gaagatgaccttcaagcactcaaagagtcgctgcagatgtctctgagtctccttcctcca
gatgccctggttggtcttatcacttttgggaggatggtgcaggttcatgagctaagctgt
gaaggaatctccaagagctatgtcttccgagggaccaaggatttaactgcaaagcaaata
caggagatgctgggcctgaccaagtcagctatgcctgtgcagcaagtcagacctggtcaa
cctcaggagcagtctgctgtttccagcagatttctacagcccgttcacaagattgacatg
aacctcacagatcttcttggggagctgcagagggacccatggcccgtaactcaggggaag
agaccactgagatccactggtgttgctttgtccattgctgttggcttgttggagggtaca
ttcccaaatactggagccaggatcatgctgttcactggtgggcccccgacccaaggacct
ggcatggtggttggagatgaattgaagactcctattcgttcctggcacgatattgagaaa
gataatgcacggttcatgaaaaaggcaaccaagcattatgagatgcttgctaatcgaact
gctacaaatggtcactgcattgatatttatgcttgtgcccttgatcaaactggacttctg
gagatgaagtgctgtccaaatcttacaggaggcctcatggtgatgggagactcattcaac
acctctctcttcaagcagaccttccaaaggatttttagtaaagacttcaacggagatttc
agaatggcgtttggtgctaccctggaagtcaagacctctcgggaactgaagattgcaggt
gccattggtccatgtgtgtctctgaatgtgaaaggaccatgtgtgtcagaaaatgagctc
ggcgttggtggcacaagtcagtggaagatctgtggcctggatccttcgtctactcttggc
atctactttgaagttgtcaatcagcacaatgccccgattccccagggaggcagaggtgcc
atccagtttgtcactcagtatcagcattccagcactcagaagcgcatccgagtgaccacc
attgcccgcaattgggcagatgcacagagtcagctgaggcacatagaagcagcgtttgac
caggaggctgcagcagtcttgatggcacggcttggagtgttccgggcagagtcagaggag
gggcctgacgtgctccggtggctggatcgacaactcatcagactgtgtcagaagtttgga
cagtataacaaagaagaccccacgtctttcaggctgtcagactccttttctctgtatcct
cagttcatgttccatctgaggagatctccgtttcttcaagtgtttaacaacagtcctgac
gagtcgtcctattatagacaccattttgcccggcaggatctgactcagtccctcatcatg
atccagcccattctctactcttactccttccacggacccccagagcctgtactcctggac
agcagtagcattctagctgacagaattctgctgatggatactttcttccaaattgtcatt
taccttggtgagaccatagcccagtggcggaaagctggctaccaggacatgcctgagtat
gagaacttcaagcaccttctgcaggcaccgctggatgatgcccaagaaattctgcaagca
cgcttcccaatgccacgatatatcaacacagagcacggtggcagtcaggctcgattcctg
ttgtctaaagttaatccttctcagacacacaataacctgtatgcttggggacaggaaact
ggagcgcccatcctgacagacgatgtcagcctgcaggtgttcatggatcatttgaagaag
ctggctgtgtccagtgcctcttaa

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