KEGG   Rattus norvegicus (rat): 362612
Entry
362612            CDS       T01003                                 
Symbol
Srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    362612 (Srsf4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    362612 (Srsf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    362612 (Srsf4)
Spliceosome [BR:rno03041]
 Common components
  Common spliceosomal components
   SR proteins
    362612 (Srsf4)
SSDB
Motif
Pfam: RRM_1 RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 362612
NCBI-ProteinID: NP_001102155
RGD: 1561347
Ensembl: ENSRNOG00000010007
UniProt: A6ISR1 G3V798 B1H240
Position
5:149345538..149373309
AA seq 488 aa
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSR
RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRS
RSKKEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSR
SRSQERRAEEERRSSTSRGHSQEKSLLKSRSRSRSKVGSRSRSRSKSKDKRKGRKRSREE
SRSRSRSKSERSRKHSSKRDSKVSSSSSKKKKGDTDHSRSPSRSVSKEREHATAEPGQRE
SRAEGESEGPNPEPRARSRSTSKSKPSLPAESRSRSKSASKTRSRSKSPSRSASRSPSRS
RSRSHSRS
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgccgcgcgtgtacatcggccgcctgagctaccaggcccgggagcgcgatgtggagcgc
ttctttaagggctacgggaagatcctggaggtggatctgaagaacgggtatggttttgtg
gagtttgatgatctgcgtgatgcagatgatgctgtttatgaactgaatggcaaagacctc
tgtggtgaacgagtcattgttgagcatgcccgaggcccacgtcgggacggcagttacggt
tctggacgcagtggatatggttatcgaagaagtggccgagataaatatggtcctcctact
cgcacagagtacagacttattgtggagaatctgtcaagtcgatgcagctggcaagatcta
aaggattatatgcgtcaggcaggagaagtgacgtatgcagatgctcacaagggacgcaaa
aacgaaggagtgattgaatttgtgtcttactctgatatgaaaagagctttggaaaagttg
gatggaactgaagtcaacggcagaaaaatcagattagttgaagacaagccaggttctaga
cggcgccggtcttactccagaagccggagtcactcaaggtctcgctctcgaagcagacat
tctcggaagagcagaagccgaagtggtagcagtaaaagcagccattcaaagagccgctct
cgatccaggtcgggttcccactcccgcagcaagagccgcagccgcagccagagccgcagt
cgcagtaagaaggagaaaagccggagccccagcaaagacaacaagagccgcagtcgcagc
cgcagccccgacaagagccgaagcaaaagtaaagaccatgcagaggacaagctccagaac
aacgacagcgctggcaaagccaagagccacagccccagccgccatgacagtaaaagtcgg
agcaggagccaggagaggagagcagaggaggagaggagaagcagcacgagcaggggtcac
agccaggagaagagcctgcttaagagccgcagccgcagccgcagcaaagtgggcagccgc
agccgcagccgcagcaaaagcaaggacaagcggaagggccggaagagaagcagggaagaa
agtcgaagccggagccgcagcaagagcgagcgcagccggaagcatagcagcaagcgggac
agcaaagtcagcagcagcagcagcaagaagaagaagggagacaccgaccactcccggtca
ccgtcccgctcagtgtcaaaggagcgggaacatgccacggcagagcctggccagagggaa
agccgggctgagggtgagagcgagggtcccaatccagagccccgggccaggtcaagatcc
acttccaaatccaaacctagtctcccggcagagtcccgctccaggtcaaagtcagcttca
aaaacgcgctctcggtccaagtctccatccaggtctgcttccaggtcgccctcccggtct
agatccaggtcccactcaaggtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (3)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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