KEGG   Rattus norvegicus (rat): 499877
Entry
499877            CDS       T01003                                 
Symbol
Ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
  KO
K10625  E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    499877 (Ubr1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     499877 (Ubr1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   UBR box proteins
    499877 (Ubr1)
SSDB
Motif
Pfam: PRT6_C zf-UBR ClpS
Other DBs
NCBI-GeneID: 499877
NCBI-ProteinID: NP_001171543
RGD: 1562326
Ensembl: ENSRNOG00000037207
UniProt: D5MTG9
Position
3:complement(128265160..128377830)
AA seq 1757 aa
MADEEMDGAERMDVSPEPPLAPQPPASWWDQQGDFYTAFLHHLAKLVPEIYFAEMDPDLE
KQEENVQMSIFTPLEWYLFGEDPDVCLERLKHSAAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQSSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCMDHEPGRAGTTKETLHC
PLNEEVIAQARRIFPSVIKYIVEMTIWEEEKELPPELQRREKNERYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGVYSACQEAKEDIKSHSENVSQHPLHV
EVLHSVVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLIEEPGSEHPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHERSISITALSVQ
VFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPLVWTERLRAQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEDLLLVAYKECHKAVMRCSTNFMSSTKTVVQLCGHSLETKSYKV
SEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVPFDGFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASIMDPNKFLLLVLQRYELADA
FNKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVIMREITHLLCIEP
MPHSAIARNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKVTDLLNCDIMMHILRTIFERAVD
PESNLWTEGMLQMAFHILALGLLEEKQQLQKAPEEEVAFDFYHKASRLGSSAMNAQNIQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLVVASTSGLESIKSEEITHDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDNTSEITGKEDSIMEEESPSAVSEC
SRIALGPKRGPALTEKEVLTCILCQEEQEVKLENNAMVLSACVQKSTALTQHRGKPAGLL
GESLDPLFMDPDLAHGTYAGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPIIPLQPQKINSENAEALSQLLTLARWIQTVLARISGYNMKHAKGEAPA
VPVLFNQGMGDSTFEFHSILSFGVQSSVKYSNSIKEMVILFATTIYRIGLKVPPDELDPR
VPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAVAQRTTCPQVLIQK
HLVRLLSVVLPNLQSENTPCLLSVDLFHVLVGAVLAFPSLYWDDTVDLQPSPLSSSYSHL
YLFHLVTMAHMLQILLTVDADQSPGLPLNEGGEDSEEARCASALFVEVSQHTDGLIGCGA
PGWYLWLSLRNGITPYLRCAALLFHYLLGVTPPEELFANSAEGEFSALCSYLSLPTNLFL
LFQEYWDTIRPLLQRWCGDPALLNSLKQKSALVRYPRKRNSLIELPDDYSCLLNQASHFR
CPRSSDDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACVFHALQCGAGVCIFLKIRE
CRVVLVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIA
RSQETNQMLFGFNWQLL
NT seq 5274 nt   +upstreamnt  +downstreamnt
atggcggacgaagagatggacggcgccgagaggatggacgtcagcccggagcctcccctg
gcccctcagccgcccgcatcctggtgggatcagcaaggtgatttttatactgctttctta
catcatttggcaaaattagtgccagaaatttattttgctgagatggacccagatttggaa
aagcaagaagagaatgtacaaatgtcaatattcactcctttggaatggtacttatttgga
gaggatccagacgtttgcttagagagattaaagcacagtgcagcatttcagttgtgcggg
aaggttttcaaaagtggagaaacaacatattcctgtagggattgtgcaattgatccaacg
tgtgtgctctgtatggactgcttccagagtagtgttcataaaaaccatcgttacaagatg
catacttctactggaggaggcttctgtgactgtggagacacagaagcgtggaaaactggt
cccttttgtatggatcacgaacctggaagagcaggtactacaaaagagaccttgcattgc
ccactgaatgaagaggtaattgctcaagccaggagaatattcccttcagtgataaagtac
attgtagaaatgactatatgggaagaggaaaaggaactgcctcctgaactgcagagaagg
gagaaaaatgaaagatattactgtgtccttttcaacgatgagcaccattcatatgatcat
gtgatatacagtctgcaaagagctcttgactgtgagcttgcagaggcacagttgcacaca
actgccatagacaaagagggtcgccgggctgtcaaagcaggtgtgtattccgcttgccag
gaagcaaaggaggatataaagagtcactcagagaacgtctctcagcaccccctccatgtg
gaagtgctgcattccgtggttatggcccaccagaaatttgctctgcgccttggatcctgg
atgaacaaaattatgagctattcaagtgactttaggcagatcttctgccaagcctgcctc
atagaggagcctggctctgaacatccctgtcttataagcagactaatgctttgggatgca
aaactttataaaggtgcccgtaagatccttcacgaattgatctttagtagtttttttatg
gagatggaatacaaaaaactctttgctatggaatttgtgaagtattataaacaactacag
aaagagtacatcagtgacgaccacgagagaagcatctctataaccgcactgtccgttcag
gtgttcactgtccccaccttggcccgacatcttattgaagagcagaatgttatttctgtc
attactgaaactctgctggaagttctacctgagtacttggacaggaacaataagttcaac
ttccagggctatagccaggacaagctgggaagagtgtacgcggtgatctgtgacctgaag
tacatcctgattagcaagcctctcgtatggacagaaagactaagagcacagttcctggaa
gggttccggtcttttctgaagattctcacctgtatgcagggaatggaagaaatcagaaga
caagttggacagcacattgaagtagaccctgactgggaggctgccatcgctatacagatg
caactaaagaatattttgctcatgttccaagagtggtgtgcttgtgatgaagatctctta
ctagtggcttataaagaatgtcacaaagctgtaatgaggtgcagcacaaatttcatgtct
agtaccaagacagtagtacaactgtgtggtcatagtttggaaactaaatcctacaaagtg
tctgaggaccttgtcagcatacatctaccactctctagaactctcgctggtcttcatgta
cgtttaagcagactaggtgctgtttcaagactgcatgaatttgtgccttttgatggcttt
caagtagaggtcctagtagagtaccctttgcgctgcctggtgctggttgctcaggttgtt
gccgagatgtggcgaagaaacgggctctccctcattagccaggttttctattatcaagat
gttaaatgcagggaagaaatgtatgataaagatatcatcatgcttcagattggagcgtct
ataatggatcccaacaagttcttgttactggtacttcagaggtatgaacttgctgatgct
tttaacaagaccatatccacaaaagaccaggatttgattaaacagtataacacattaata
gaagaaatgcttcaggtcctcatctatattgtgggagaacgttatgtacccggagtggga
aacgtgaccaaagaggaggttataatgagagagatcactcacttactttgcattgagccc
atgccacacagtgccattgccagaaacctaccggagaatgaaaataacgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccgggtgtgtcgggccatggtgtt
tatgaattgaaagacgaatcactgaaagacttcaatatgtacttttaccattattctaaa
acacagcatagcaaggctgaacatatgcagaagaagaggagaaaacaagaaaataaagat
gaagccttgccaccgccacctcctcctgagttctgtcccgctttcagcaaagtaactgac
cttctcaactgtgatattatgatgcacattctcaggaccatcttcgagcgggcagtggac
cccgagtctaatctgtggacagaagggatgctccaaatggccttccatatattggcgctg
ggcttgctggaggagaagcagcagcttcagaaagctcctgaagaagaagtggctttcgac
ttttaccataaggcttcaagattgggaagttcagcaatgaatgctcagaatatacaaatg
cttttggaaaaactcaaaggaatcccccaattagaaggccagaaggacatgataacatgg
attctccagatgtttgacacagtgaagcgattaagagaaaaatcttgtttagttgtggca
agcacttcaggattggagtccattaaaagtgaggagattactcatgataaagaaaaagca
gaacggaagagaaaagctgaagctgctaggctacatcgccagaagatcatggcccagatg
tctgccttacagaaaaacttcattgaaactcacaaactcatgtatgacaatacatcagaa
ataacagggaaggaagactccattatggaagaagaaagcccctcagcagtcagtgagtgc
tctcgaattgctctgggccctaaacggggcccagctcttacagaaaaggaggtgctgacg
tgcatcctctgccaagaagaacaagaggtgaaactagaaaacaacgccatggtgttgtcc
gcctgtgtgcagaaatccaccgccctaacccagcacagggggaagcctgcgggcctctta
ggggaatcactggaccctcttttcatggatccagacctggcacatggcacttacgcagga
agctgtggtcatgtaatgcatgcagtgtgctggcagaagtattttgaagcagtgcagctg
agctctcagcagcgcattcacgtcgacctgtttgacttggagagtggagagtacctgtgc
cctctctgcaagtctctctgcaataccgtcatccccatcattcctttgcagccacagaag
atcaacagtgagaatgcagaggctctttctcaacttttgaccttggcacggtggatacag
actgtccttgcaagaatatcaggttataatatgaaacacgctaaaggagaagctccagca
gttcctgtcctgtttaatcaaggaatgggggattctacttttgagtttcattccatcctg
agttttggagttcagtcttcggtgaaatactcaaatagtatcaaggaaatggtcattctc
tttgccacaacaatttacagaatcggcctgaaagtgcctcctgatgaattagacccacga
gtacccatgatgacctggagcacgtgtgctttcaccatccaggcaattgaaaaccttttg
ggagatgaaggaaaacctctatttggagcacttcaaaatagacagcataatggtctgaaa
gcgttaatgcaatttgcagttgcacagaggactacctgtcctcaggtcctgatacagaaa
catctggttcgactcctatcagttgttcttcctaacctacaatcagaaaatacaccatgc
cttctatccgttgatctatttcatgttctggtgggcgctgtcttagcgttcccgtccttg
tactgggatgacacggtggatctgcagccttcaccgctcagctcttcatacagccacctt
tatctcttccatctggtcaccatggcccatatgcttcagatactcctcacggtagatgca
gatcagtctccgggactcccacttaatgagggtggagaggacagtgaagaggctcgctgt
gcgtctgctctcttcgtggaagtctcacagcacacagacggcctcattgggtgtggtgct
cctggctggtacctgtggctctccctgaggaatggcatcaccccttacctccgctgtgct
gcactgcttttccactatttactcggagtaactccgcctgaagaactgtttgccaactct
gctgaaggagaattcagtgcactctgtagctatctctctttacccacaaatttgttcctg
cttttccaggaatattgggataccataaggcccttacttcagaggtggtgtggagatcct
gccttactcaactctttgaagcagaaaagtgctctggtcaggtaccctagaaaaagaaat
agtttgatagagcttcctgatgactacagctgtcttctaaatcaagcttctcactttagg
tgtccacggtcttcagatgatgaacgaaagcaccctgtcctctgtcttttctgtggggcc
atcctgtgttctcagaacatctgttgccaagaaatcgtgaatggggaggaggttggagcg
tgcgtttttcatgcacttcagtgtggtgctggagtctgcattttcctaaaaatcagagaa
tgcagagtggtcctggtagaaggaaaagccagaggctgtgcctacccagccccttacttg
gatgaatatggagaaacagacccagggctaaagaggggaaacccacttcatttatctcgg
gagcggtatcggaagctgcatttggtctggcaacagcactgcattatagaagagattgct
cggagccaggagactaatcagatgctgtttggattcaactggcagttactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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