KEGG   Rattus norvegicus (rat): 500084
Entry
500084            CDS       T01003                                 
Symbol
Trim24
Name
(RefSeq) transcription intermediary factor 1-alpha
  KO
K08881  tripartite motif-containing protein 24 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rno01001]
    500084 (Trim24)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    500084 (Trim24)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     500084 (Trim24)
Protein kinases [BR:rno01001]
 Serine/threonine kinases: Other
  TIF1 family [OT]
   500084 (Trim24)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    500084 (Trim24)
SSDB
Motif
Pfam: Bromodomain zf-B_box ANCHR-like_BBOX PHD PHD-1st_NSD zf-RING_UBOX zf-RING_5 zf-C3HC4 zf-C3HC4_2 CRIC_ras_sig
Other DBs
NCBI-GeneID: 500084
NCBI-ProteinID: NP_001382682
RGD: 1560596
Ensembl: ENSRNOG00000013251
UniProt: A6IEQ8 A0A8I6AI80
Position
4:67534240..67659014
AA seq 1050 aa
MEVAVEKAAAAAALAGAPAAAAPSGENEAESRQGPDSESGGEVSRLNLLDTCAVCHQNIQ
SRVPKLLPCLHSFCQRCLPAPQRYLMLTAPSLGSAETPPPAPVPAPAPGSPAGGPSPFAT
QVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECV
EWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDK
LTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKYTGNQIQNRIIEVNQ
NQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVM
HFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINL
GSLVIEEKESQPQMPKQNPVVEQSSQPPGGLPSNQLSKFPTQISLAQLRLQHIQQQVMAQ
RQQVQRRPAPVGSPNPRMQGPIQQPSISLQHPPPRLINFQNHSPKPNGPVLPPYPQQLRY
PPSQNIPRQAIKPNPLQMAFLAQQAIKQWQISSGQATPTTASSSSSTPSSPTITSAAGYD
GKAFSSPMIDLSAPVGGSYNLPSLPDIDCSSTILLDNIARKDTSVDPGQPRPPSNRTVQS
PNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI
RIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLLNSSQSSASEETVLRS
DAPDSTGDQPALHHENSPNGKSEWPDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLC
CEKCPKVFHLTCHVPTLTHFPSGEWICTFCRDLSKPEVEYDCDAPSHNSDKRKSEGLTKL
TPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYT
KPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKLEFRHDVE
DCKFSDDSDDDFVQPRKKRLKSMEDRQLLK
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggaggtggctgtggagaaggcagcggcggcggcggctctggccggggcccccgcagcg
gcggcgccgagcggggagaatgaggccgagagccggcagggcccggactcggaaagcggc
ggcgaggtgtcccggctcaacctgttggacacttgcgccgtgtgccaccagaacatccag
agccgggtgcccaagctgctgccctgcctgcactcgttctgccagcgctgcttgcccgca
ccccagcgctatctcatgctgacggcgccctcgctgggctcagcagagacccctccaccg
gctcctgtccccgcccccgccccgggctccccggccggtggtccttcgccattcgccacc
caagttggagtcattcgatgcccagtttgcagtcaagagtgtgctgaaagacacatcata
gacaacttttttgtgaaggacaccactgaggttcccagtagtacagtagaaaagtcaaat
caggtatgtacaagctgtgaagacaatgcagaagctaatgggttttgtgtagagtgtgtt
gaatggctctgcaagacatgtattagagctcaccagagggtgaagttcacaaaagaccac
acagtcaggcagaaagaagaagtatctccagaggcagttggtgtgaccagtcagcgacca
gtgttttgtccgttccataaaaaggagcagctgaaactctactgtgaaacgtgtgataag
ctgacatgtcgagactgccagctgctagaacacaaagagcacagatatcaatttatagaa
gaagcttttcagaatcaaaaagtaatcatagatactctaatcaccaaactgatggaaaaa
acaaaatatataaagtacacaggaaatcagatccaaaataggataattgaagtaaatcaa
aaccaaaagcaggtggaacaggatattaaagttgccatcttcacattgatggtggagata
aacaagaaagggaaagccctgctgcaccagcttgagagtcttgcaaaagaccatcgaatg
aaacttatgcaacagcagcaggaagtggctgggctttctaagcagttagagcatgtcatg
catttttctaaatgggctgtttccagtggcagcagcacagccttgctgtacagcaagcgg
ctgattacatacaggttacggcaccttctccgtgcaaggtgtgatgcttctcctgtgacc
aacaacaccatccagtttcactgtgatcctagtttctgggctcaaaatattatcaacttg
ggttctttggtaatcgaggagaaagagagccagccacaaatgcctaagcagaatcctgtc
gtggaacagagctcccagccaccaggtggtttaccctccaaccagttatccaagttccca
acacagatcagcctagctcagttacgactccagcatattcagcaacaggtaatggctcag
aggcaacaggtgcaacggaggccggcacctgtgggttcaccaaaccctagaatgcagggg
cccatccagcagccttccatctctcttcagcatccaccaccacgcttaataaactttcag
aaccacagccctaagcccaatggaccagtgcttcctccttatcctcagcagctgaggtac
ccacccagccagaatataccacggcaggcaataaagcccaaccccctgcagatggctttt
ttggctcaacaggccataaaacagtggcagatcagcagtggacaggctacgcctacaact
gccagcagctcctcctccactccttccagtcccacgatcacaagtgcagctgggtacgat
ggaaaagctttcagttcacccatgattgatctgagtgcaccagtgggagggtcttacaat
cttccttctcttccagatattgattgttcaagtactatcttgttggacaatattgcaagg
aaggatacaagtgtagaccctggccagccaagacctccatcaaacagaaccgtgcagtca
ccaaattcatcagtgccgtctccaggcctggcagggcctgttactatgactagtgtccat
cccccaatacgttcacctagtgcctccagtgttgggagccgaggaagctcgggctcttcc
agcaaaccagcaggagcggattctactcacaaggtcccagtagtcatgctggagccaatt
cgaataaaacaggaaaacagtggaccacctgaaaactatgattttcctgttgttatagta
aaacaagaatcagatgaagaatctagacctcaaaatactaactatccaaggagcatactg
acctccctcctcctaaacagtagccagagctctgcttctgaggagacggtgttacggtcc
gatgcccctgatagtacaggagatcagcctgcactccatcatgaaaactccccaaatgga
aagtctgagtggccggatgcctcccagaagtcccctgtgcatgttggagagacaagaaag
gaggatgaccccaatgaagactggtgtgctgtttgtcaaaatggtggagaactcctatgc
tgtgagaaatgtcccaaagtattccatcttacttgtcatgtgcccacactgacacatttt
ccaagtggagaatggatttgtactttctgccgggacttatctaagccagaagttgaatat
gattgtgatgctcccagtcacaactcagataaaaggaaaagtgaaggccttactaaacta
acaccaatagacaaaaggaaatgtgagcgcctgctcctgttcctttactgccatgagatg
agcctggctttccaggaccccgtccctctgactgtgcctgattattataaaataattaaa
aacccaatggacttgtcaaccatcaagaaaagacttcaggaggattattgcatgtataca
aagcctgaagattttgtagctgattttagattgatctttcaaaactgtgctgaattcaat
gagcctgattctgaagtagccaatgccggtataaaacttgaaagctattttgaagaactt
ctaaagaatctttatccagagaagaggttccctaagctagaattccggcatgacgtggaa
gactgtaagttcagtgacgactcggatgatgactttgtgcaaccccggaagaagcgcctc
aagagcatggaagaccggcagctgctcaagtga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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