KEGG   Rattus norvegicus (rat): 500319
Entry
500319            CDS       T01003                                 

Gene name
Tuba3a
Definition
(RefSeq) tubulin, alpha 3A
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500319 (Tuba3a)
  09143 Cell growth and death
   04210 Apoptosis
    500319 (Tuba3a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500319 (Tuba3a)
   04540 Gap junction
    500319 (Tuba3a)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500319 (Tuba3a)
   05012 Parkinson disease
    500319 (Tuba3a)
   05014 Amyotrophic lateral sclerosis
    500319 (Tuba3a)
   05016 Huntington disease
    500319 (Tuba3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500319 (Tuba3a)
   03036 Chromosome and associated proteins [BR:rno03036]
    500319 (Tuba3a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500319 (Tuba3a)
   04147 Exosome [BR:rno04147]
    500319 (Tuba3a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500319 (Tuba3a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     500319 (Tuba3a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500319 (Tuba3a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500319 (Tuba3a)
  Exosomal proteins of other body fluids (saliva and urine)
   500319 (Tuba3a)
  Exosomal proteins of colorectal cancer cells
   500319 (Tuba3a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500319
NCBI-ProteinID: NP_001035097
RGD: 1565719
Ensembl: ENSRNOG00000031707
UniProt: Q68FR8
Position
4q42
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtggggcaggcaggtgtccagattggcaatgcctgc
tgggaactgtactgccttgaacatggtattcaacctgacggtcaaatgccaagcgacaaa
accattggcggtggggacgactcattcaacacgttcttcagtgagactggcgccggcaag
cacgtgcccagagcagtgtttgtggacctggagcccactgtggtcgatgaagtgcgcacg
ggaacctaccggcaactcttccacccagagcagctgatcactgggaaggaagatgcagcc
aataattatgccagaggtcactacaccattggcaaagagattgttgacctggtcctggac
agaatccgaaaactggctgatctgtgcacggggctgcagggcttcctcatcttccacagc
tttggagggggcacagggtctgggtttgcatctctgctgatggagcggctttccgtggac
tacggcaagaagtccaagctggagtttgccatctacccagccccccaggtctccacggct
gttgtggagccttacaactccatcctgaccacacacacgacactggagcactctgactgt
gctttcatggtggataatgaagccatctacgacatctgtcggcgaaacctggacattgaa
cgtcccacttacaccaacctcaatcgtctgattgggcagattgtgtcgtccatcacagcc
tctctgaggttcgacggggccctgaatgtggacttaacagaattccagaccaacctggtg
ccataccctcgaatccacttcccactggccacctatgccccggtcatctccgccgagaag
gcctaccatgagcagctgtcagtggcagagatcaccaacgcttgctttgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttccaaaagatgtcaacgcggctattgctaccatcaaaaccaagcgtacc
atccagtttgtggattggtgtccaactggctttaaggtgggcattaactaccagcctccc
accgtggtccctgggggcgacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accactgccatcgcagaggcctgggcccgcctggaccacaaatttgacctcatgtacgcc
aagcgggccttcgtgcattggtacgtgggagagggcatggaggaaggggagttctcagag
gcccgggaggacctggccgcgctggagaaagattatgaagaggtgggcgtggattctgtg
gaagcagaggcagaagaaggggaggagtactga

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