KEGG   Rattus norvegicus (rat): 501552
Entry
501552            CDS       T01003                                 

Gene name
Fancb, RGD1561555
Definition
(RefSeq) Fanconi anemia, complementation group B
  KO
K10889  fanconi anemia group B protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    501552 (Fancb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    501552 (Fancb)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     501552 (Fancb)
SSDB
Motif
Pfam: T3SS_basalb_I
Other DBs
NCBI-GeneID: 501552
NCBI-ProteinID: NP_001178932
RGD: 1561555
Ensembl: ENSRNOG00000003346
UniProt: D4A5I2
Position
Xq14
AA seq 853 aa
MPFNEQAKFLCYNGEVLVFQLSGGEFADLEKPTDPSVLGVKRMIFDRETSTFLLISTVFL
NINEKDSHLKILCCNCVSDFRTRINLPCILIQCRKYNSKAFKYYILFLHSPNQLEKLLSF
ELNHALDERAKIFDGPIVFWQYLNQFFYISSEIGKVTNISVSLSSIEWIGEIENFGLGFL
GLADPSGDKYKCTRKLSESDYEFSNSSFCAYALKSQEMLSNSYLIPLAYSTVVTRVHVCA
AEMVNKQLKMSLIALTRKNQLILFQNGIPVRTCQLPFLDPRSVQILDAGKRNRFFIVSFL
SKACAVSEKKFKVVAKWEQLSLVLVNDFAGVGTEQVLVVFEDSLDADQLTSFTVTDFVKI
WYSTKPLDCCEDPLAEEEHENYYLVLPALEAQLDNSFIFLNQFQQHISFKDKFIANSWKA
LLNSVYGNVDSMPSDEEVQLEQGGLVPFCDEDENSVPTPEENLPDNFPEPEHVIEQTWCH
VLDDDLVVGVKVTSLKPSDGMTLSLIMDQANRSSFHLMKCQSQLISLSMNSFPETYLLSK
ETGPEIKRMKLTSGSQEEESSFCGQSAKAESTYVITAITSLSPLLVFNKLSCTVLLNVSD
RDNPKNTVHDYVFCGHLDFNLQDLFSKNHLLAFPKKQSIEQTENLFSLLTALPKYAFCVT
SPTHAPNLMKVWLLKHMKCAKIQECTEIYLYKKLRNCEALFSWEQRTAFEGILTIYCRSL
GVLFQCLDHLIKVIPEICSFKYLRFENEDFLVDHLSSTLEAELVTFCSVSTSAFEYVRGG
CMYNCSTSKTDNRATTFSGRRAKIRHYKRQVQREKILKHLNRTVNVSSYAEMTLALAEIQ
LRSDLIVKTLTDL
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgccatttaatgagcaagcaaagttcttgtgctataatggggaagtccttgtttttcag
ttgtctggaggagagtttgcagatttagaaaagcctacagatccatctgtcttaggtgtc
aaaaggatgatatttgacagagaaactagtacattccttctgatatccacagttttttta
aacatcaatgagaaagattctcatttaaaaattctgtgttgtaactgtgtgtcagatttc
agaactagaattaaccttccttgcattttgatacaatgtagaaaatacaatagcaaagct
ttcaaatattatatactgtttcttcacagtcccaaccagttggaaaaacttttgagtttt
gaactaaaccatgcattggacgagagggcaaagatctttgatggccctatagttttttgg
caatatctcaatcaattcttctatatctcttccgaaattgggaaagttactaatatatca
gttagcctttcctcaatcgagtggataggtgagattgaaaattttggcttaggtttcttg
gggctagcagatccatctggggataaatataaatgtacccgcaagctttcagaatcagat
tatgaattttccaattccagcttttgtgcatatgctcttaaaagtcaagaaatgttaagc
aatagttacctgatccctctggcttacagtactgtggtaactcgtgtgcatgtctgtgca
gccgagatggtgaacaagcagttaaaaatgtctctgattgccctgacgcgaaagaatcag
cttattttgttccagaatggcattcccgtaagaacttgtcagcttccatttctagatccc
cgttcagttcaaattctagatgcagggaaaagaaaccgatttttcatcgtgtcattcctg
tccaaggcttgcgctgtttcagaaaagaaatttaaggttgtggctaagtgggaacaactt
agcttggtactggttaatgactttgctggagttggaactgagcaagtcctggtcgttttt
gaggactctctggatgcagatcagctgacctcatttacagtaacagattttgtcaaaata
tggtattcaaccaaaccactggattgctgtgaagaccctctggctgaagaggaacatgaa
aattattatttggtgcttccagcactggaagcccaattagacaattcttttatttttctt
aaccaattccagcagcatatctcatttaaggataaatttattgcaaactcttggaaggct
cttttaaactcagtttatgggaacgttgatagtatgccaagtgacgaggaggtacagtta
gaacagggtggtcttgttcccttctgtgatgaagatgaaaacagtgtccctacccctgag
gaaaacttaccagacaattttccagagccagaacatgttatagagcagacatggtgccat
gtgctagatgatgacttagttgttggcgtgaaagtcacatctttgaagccgtctgatggg
atgactttatcactgataatggatcaagccaacaggtccagttttcatcttatgaagtgt
caaagtcagttgattagtttgagtatgaattcttttccagaaacatacttgttgtcaaag
gaaacaggaccagagatcaaaaggatgaagctgacctctggtagccaggaagaggaaagc
tctttttgcggacagtcagctaaggcagaatctacatacgtaatcactgctataacgtct
ctttctccactgttagtattcaacaaattgtcttgcactgtgctgctaaacgttagtgac
agagataaccctaaaaatactgtgcatgattatgttttctgtggccaccttgattttaat
ctgcaagatctttttagtaagaaccacctactggcattcccgaagaagcaatcaatagaa
cagacggagaatcttttttcacttctcacagcattgcccaagtatgccttctgtgtcacg
tcacctacccatgcccccaatttaatgaaggtatggctcttaaaacacatgaaatgtgca
aaaatccaagaatgcacagaaatatacctttataaaaagctacgaaattgtgaagcactc
ttctcctgggagcagagaacagcatttgaaggaattttaacaatatattgcaggagccta
ggagttttgttccagtgtctcgaccatctcatcaaagttattcctgaaatatgttccttc
aaatatctgaggtttgaaaatgaggatttcttagttgatcatttgtcatccactttggag
gcagaactggttaccttttgctctgtttctacttctgccttcgagtatgttagaggtgga
tgtatgtataactgtagcacaagcaaaacagataatagggccacgactttttcagggaga
agggccaaaatccgtcactacaagcgccaagttcagagagaaaaaatattgaagcacctg
aataggacagtaaatgtcagcagctatgccgagatgactttggcattagctgagatacag
ttgcgatcagacctcattgtaaagacactgactgatttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system