KEGG   Rattus norvegicus (rat): 58822
Entry
58822             CDS       T01003                                 

Gene name
Csnk1e
Definition
(RefSeq) casein kinase I
  KO
K08960  casein kinase 1, epsilon [EC:2.7.11.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno04310  Wnt signaling pathway
rno04340  Hedgehog signaling pathway
rno04390  Hippo signaling pathway
rno04392  Hippo signaling pathway - multiple species
rno04710  Circadian rhythm
rno05010  Alzheimer disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    58822 (Csnk1e)
   04340 Hedgehog signaling pathway
    58822 (Csnk1e)
   04390 Hippo signaling pathway
    58822 (Csnk1e)
   04392 Hippo signaling pathway - multiple species
    58822 (Csnk1e)
   04068 FoxO signaling pathway
    58822 (Csnk1e)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    58822 (Csnk1e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    58822 (Csnk1e)
   05022 Pathways of neurodegeneration - multiple diseases
    58822 (Csnk1e)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rno01001]
    58822 (Csnk1e)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    58822 (Csnk1e)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     58822 (Csnk1e)
Protein kinases [BR:rno01001]
 Serine/threonine kinases: CK1 group
  CK1 family [OT]
   58822 (Csnk1e)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Kinases and associated factors
    58822 (Csnk1e)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Pkinase_fungal ABC1 APH Pox_ser-thr_kin Kdo
Other DBs
NCBI-GeneID: 58822
NCBI-ProteinID: NP_113805
RGD: 62045
Ensembl: ENSRNOG00000013076
UniProt: Q9JJ76
Position
7
AA seq 416 aa
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN
PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRIQQAG
NTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRIAASQTSVPFDHLGK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggagctgcgtgtgggaaacaagtatcgcttgggccggaagatcggcagtgggtccttt
ggcgacatctacctgggtgccaacattgcctctggtgaggaagtagccatcaagctcgaa
tgtgtgaagacgaagcacccacagctccacatcgagagcaagttctacaagatgatgcag
ggaggagtggggatcccatccatcaagtggtgcggggctgagggtgactataacgtgatg
gtcatggagttgctggggcccagcctggaagacctcttcaacttctgttcccgaaagttc
agcctcaagacggtgctgctgctggccgaccagatgatcagccgcatcgagtatatccac
tccaagaacttcatccaccgggacgtgaagcctgacaacttcctcatgggcctggggaag
aaaggcaatctggtatacatcattgacttcggcctggccaagaagtaccgggatgcccgt
acacaccagcatattccctaccgggaaaacaagaacctgaccggcactgcccgctatgcc
tctatcaacacccacctgggcattgagcaaagccgtcgagatgacctggagagcctgggc
tatgtgctcatgtacttcaacctgggctccctgccctggcaaggcctcaaagcagccacc
aagcgtcagaagtacgagcggatcagcgagaagaagatgtcaacgccgatcgaggtcctc
tgcaaaggctacccctctgagttctcaacttacctcaacttctgccgctccctgcggttc
gatgacaaacctgactactcctacctgcgccagctcttccgcaatctctttcaccggcag
ggtttctcctatgactacgtcttcgactggaacatgctcaaattcggtgcagcccggaat
cccgaggacgtagaccgggagagacgagagcacgaacgggaagagaggatgggacagttg
cgagggtccgcgaccagagccctgccccctggcccaccaacaggggctaccgccaaccga
ctccgaagtgcagccgagcctgtggcttccaccccggcctcccgcatccagcaagctggc
aatacttctcccagagcgatctcacgggcagaccgagagaggaaggtgagcatgagactc
cacagaggtgcgcctgccaatgtctcatcctcagacctcactgggcgacaagaggtctcc
cgaattgcagcctcacagacaagcgtgccatttgaccatcttgggaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

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KEGG   Rattus norvegicus (rat): 64462
Entry
64462             CDS       T01003                                 

Gene name
Csnk1d
Definition
(RefSeq) casein kinase I isoform delta
  KO
K08959  casein kinase 1, delta [EC:2.7.11.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04340  Hedgehog signaling pathway
rno04390  Hippo signaling pathway
rno04540  Gap junction
rno04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    64462 (Csnk1d)
   04390 Hippo signaling pathway
    64462 (Csnk1d)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04540 Gap junction
    64462 (Csnk1d)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    64462 (Csnk1d)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rno01001]
    64462 (Csnk1d)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    64462 (Csnk1d)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     64462 (Csnk1d)
Protein kinases [BR:rno01001]
 Serine/threonine kinases: CK1 group
  CK1 family [OT]
   64462 (Csnk1d)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Kinases and associated factors
    64462 (Csnk1d)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Pkinase_fungal APH Pox_ser-thr_kin
Other DBs
NCBI-GeneID: 64462
NCBI-ProteinID: NP_620691
RGD: 71031
Ensembl: ENSRNOG00000036676
UniProt: Q06486
Structure
PDB: 
1CKI 1CKJ

Position
10
AA seq 415 aa
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA
ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV
SGMERERKVSMRLHRGAPVNVSSSDLTGRQDTSRMSTSQIPGRVASSGLQSVVHR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggagctgagggtcgggaacaggtaccgactgggccgcaagatcggcagcggctccttc
ggagacatctatctcggtacggacattgctgcaggagaagaagttgccatcaagcttgaa
tgtgtcaaaaccaaacatcctcagctccacattgagagcaagatctacaaaatgatgcag
ggaggagtgggcatccctaccatcagatggtgtggggctgagggggactacaatgtcatg
gtgatggagctactgggacccagcctggaagacctattcaacttctgttcaaggaagttt
agtctcaaaactgttctgttgcttgctgaccaaatgataagtcgtattgagtacattcat
tcgaagaattttatccaccgagacgtgaaaccagataacttcctcatggggctgggaaag
aaaggcaacctggtctacatcattgactttgggctggccaagaagtatcgggatgcccgc
acccaccagcatatcccctatcgagagaacaagaacctcacagggacagcacgctatgcc
tccatcaacacacaccttggcattgaacaatctcgaagggatgacttggagtctctgggg
tacgtgctgatgtacttcaacctgggctctctcccctggcaggggctgaaggccgccacc
aagaggcagaagtatgagaggatcagtgagaagaagatgtccactccaattgaagtgctg
tgcaagggctatccttctgaatttgccacatacctgaatttctgccgttccttacgtttt
gatgacaaacctgactactcctacctgagacagctcttcagaaatctgttccatcgccag
ggcttctcctacgactatgtgttcgactggaacatgctcaaatttggtgccagccgggct
gcagatgatgctgagcgggaacgccgggaccgagaagaacgattaagacactcccggaat
ccagccactcgtggcctcccttctacagcttccggccgtctgcggggaacccaggaagtg
gctcccccaacgccccttacccctacctcacatacggccaacacctctcctagacccgtc
tctggcatggaacgagaacggaaagtgagtatgcggctgcaccgtggggccccagtcaac
gtctcctcatctgatctcacgggccgacaagatacctctcgcatgtccacctcacagatt
cccggtcgggtggcttccagtggtcttcagtctgtcgtgcaccgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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