KEGG   Rattus norvegicus (rat): 59294
Entry
59294             CDS       T01003                                 
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03030  DNA replication
rno03410  Base excision repair
rno03420  Nucleotide excision repair
rno03430  Mismatch repair
rno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    59294 (Pold1)
   03410 Base excision repair
    59294 (Pold1)
   03420 Nucleotide excision repair
    59294 (Pold1)
   03430 Mismatch repair
    59294 (Pold1)
   03440 Homologous recombination
    59294 (Pold1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    59294 (Pold1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    59294 (Pold1)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     59294 (Pold1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    59294 (Pold1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      59294 (Pold1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     59294 (Pold1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2
Other DBs
NCBI-GeneID: 59294
NCBI-ProteinID: NP_067694
RGD: 621839
Ensembl: ENSRNOG00000019681
UniProt: O54747
Position
1:complement(104161984..104178074)
AA seq 1103 aa
MDGKRRQAPSSGVPPKRACKGLWDEDEPSQFEENLALLEEIEAENRLQEAEEELQLPPEG
IVGGQFSTADIDPRWLRPTPLALDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPI
LRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSG
PAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPY
EANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQW
QRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPIL
GAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRV
TGLRSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGE
QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG
YLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATLDFS
SLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLL
SARKRAKAELAQETDPLRRQVLDGRQLALKVSPNSVYGFTGAQVGKLPCLEISQSVTGFG
RQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSS
HFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVANLV
TSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELA
ERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAK
PLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNSCIGCRSVIDHQGA
VCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKK
VRKDLEDQERLLQRFGPPGPEAW
NT seq 3312 nt   +upstreamnt  +downstreamnt
atggatggtaaacggcggcaagcgcccagctctggggtgcccccaaagcgggcttgcaag
ggcctctgggatgaagatgagccgtcacagtttgaggagaacctggcgctgctggaggag
atagaggccgagaatcggctgcaggaggccgaggaggagctgcagctgccccctgagggc
attgtgggtgggcagttttccactgcagacattgacccacggtggctgcggcccacccca
cttgccctggaccccagcacggagcccctcatcttccagcagctggagattgaccactat
gtgggcacatcacctcccctgccagaaggaccccccgcatctcgtaactcagtgcccata
ctgagggcctttggggtcaccgatgagggcttctccgtctgctgccacatccacggcttt
gccccctacttctacacccctgcacctccgggttttggggctgagcacctgagtgaacta
cagcgggagctgaatgcagccatcagccgggaccagcgtggtggaaaggagctctcgggg
ccggcagtgctagctatagagctgtgctcccgtgagagcatgtttgggtaccatggccac
ggcccttctccctttctccgcatcaccctggcactaccccgcctgatggcgccagcccgc
cgcctcctggaacagggtatccgagtgccaggcctgggcaccccgagctttgcaccctat
gaagccaatgtggactttgagatccggttcatggtggatgctgacattgtgggatgcaac
tggttggagctcccagctggaaagtacgttcggagggcagagaagaaggctacactgtgt
cagctggaggtggatgtgctgtggtcagacgtgatcagtcacccaccagaagggcagtgg
cagcgcatcgcacccctgcgtgtgcttagcttcgacatcgagtgcgctggccgaaaaggc
atcttccctgagcctgagcgtgaccccgtgatccagatctgttctctggggctgcgctgg
ggtgagccagagcccttcttgcgcctagcactcacgctgcggccttgcgcccccatcctg
ggtgccaaagtacagagctatgaacgggaagaagacctgctccaggcctgggccactttc
atcctcgccatggaccctgacgtgatcaccggctacaacattcagaactttgacctcccc
tacctcatctctcgggcacaaaccttaaaggtggaccgattccctttcctgggccgtgtg
actggtctccgctccaacatccgtgactcctccttccaatcaaggcaggtgggccggcgg
gacagtaaggtggtcagcatggtgggtcgcgttcagatggatatgctgcaggtgctgctt
cgggagtacaagctccgctcctacacgctcaacgctgtgagcttccacttcctgggtgag
cagaaggaggacgtacagcacagcatcatcactgacctacagaatgggaatgaacagacg
cgtcgccgcctggccgtgtactgcctgaaggatgcctttctgcctcttcgcctactcgag
cgccttatggtgctggtgaacaatgtggagatggcgcgtgtcactggtgtaccccttggg
tacctgctcagccgaggccagcaggtcaaggtcgtgtctcagctgctgcgccaggccatg
cgcgaggggctgctgatgcctgtggtgaagacggagggaggtgaggactacacgggagcc
actgtcattgagcccctcaaagggtactatgatgtccccattgccaccctggacttctcc
tctctgtacccatccatcatgatggcccacaatctgtgctacaccacattgctacggcct
ggggctgcccagaagttgggccttaaaccagatgagttcatcaagacacccactggggat
gagtttgtgaaggcatctgtgcggaagggcctcctgccccaaatcctggagaatctgctg
agtgcccggaagagggccaaggctgagctggctcaggagacggaccccctgcggcgacag
gtcttggatggacggcagctggcactaaaagtgagtcccaactctgtgtatggcttcact
ggtgcccaggtgggcaagctgccgtgtttggagatctcccagagtgtcactgggttcggg
cggcagatgattgagaaaaccaagcagctagtggagaccaagtacactctggaaaatggc
tacgatgctaatgccaaggtggtctacggtgacactgactctgtgatgtgccgatttggt
gtctcctctgtggctgaggcaatgtctctggggcgggaggctgcaaactgggtatccagt
cacttcccatcacccatccggctggagttcgagaaggtttactttccctacctgctcatc
agcaagaagcgctatgccggcctactcttctcctcccgctctgatgcccatgacagaatg
gactgcaagggcctggaggctgtgcgtagggacaactgtcccctggtggccaaccttgtc
acatcctctctgcgcagaatcctcgtggatcgggaccctgatggtgcagtagcccatgca
aaggatgtcatctcggacctgctgtgcaaccgcatagacatctcccaactggtcatcacc
aaagagttgacccgcgcagcagcagactacgcgggcaagcaggctcatgtggagctggct
gagaggatgaggaagcgtgaccccggcagtgcgcccaacttgggcgaccgagtaccctac
gtgatcattggtgctgccaagggtgtggccgcctacatgaagtcggaggaccccctgttt
gtgctggagcacagcctgcccattgatactcagtactacctggagcagcagctggccaag
ccgctattgcgcatctttgagcccattctgggtgagggccgcgcggagtcagtgctgctg
cgcggtgaccacacacgctgcaaaaccgtgctcaccagcaaggtgggcggccttctggcc
ttcaccaagcgccgaaactcttgtattggctgccgctccgtaatcgaccatcaaggagcc
gtgtgtaagttctgtcagccacgggagtctgagctctatcagaaggaggtgtcacacctg
aatgccctggaggaacgtttctcgcgcctctggacacagtgccagcgctgccagggcagc
ttgcacgaggatgtcatctgtaccagccgcgactgtcccatcttctacatgcgcaagaag
gtgcgcaaggacctggaggaccaggaacggctgctgcagcgctttggacctcctggccct
gaggcctggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system