KEGG   Rattus norvegicus (rat): 60376
Entry
60376             CDS       T01003                                 
Symbol
Plrg1
Name
(RefSeq) pleiotropic regulator 1
  KO
K12862  pleiotropic regulator 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    60376 (Plrg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    60376 (Plrg1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    60376 (Plrg1)
Spliceosome [BR:rno03041]
 Complex B
  Other components
   Prp19 complex
    60376 (Plrg1)
 Complex C
   Prp19-CDC5 complex
    60376 (Plrg1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    60376 (Plrg1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F KNTC1_N WDR54 Beta-prop_WDR11_2nd Beta-prop_WDR19_1st VPS8_N
Other DBs
NCBI-GeneID: 60376
NCBI-ProteinID: NP_068525
RGD: 621047
Ensembl: ENSRNOG00000006655
Vega: OTTRNOG00000001388
UniProt: Q9WUC8 A6J5V3
Position
2:170706188..170722519
AA seq 514 aa
MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPT
SKENLKEKGPQNAPDSYPHKQYPANQGQDVEYLVTGTHPYPPGPGVALTADTKIQRMPSE
SAAQSLAVALPSQTRVDANRTAPAGSEYRHPGASDRSQPTAMNSMIMETSNTKNSALMAK
KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKL
SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI
DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV
AGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLA
VNTDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTA
EADKTIKVYREDETATEETHPVSWKPEIIKRKRF
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggtggaggaggtacagaagcattctgtgcacacactagtgttcaggtcattgaagagg
acccatgacatgtttgtggctgataatggaaaacctgtgcctttggatgaagagagtcac
aagcggaaaatggcaatcaagcttcgtaatgagtatggccctgtgctgcatatgcctact
tcaaaagagaatcttaaggagaagggacctcaaaacgcaccagattcatatcctcataag
cagtatcctgccaatcaaggacaagatgttgaatatttggtgacaggtacacatccatat
ccaccaggacctggtgttgccttgactgctgatactaagatccaaagaatgccaagcgag
tcagccgcacagtccttagctgtggcgttaccgtctcagaccagagttgatgcaaatcgg
actgcgcctgctggaagtgaataccgacacccaggggcttctgaccgttcccagcccaca
gcaatgaattctatgattatggagaccagcaataccaagaactctgcattaatggctaaa
aaagcccctacaatgcccaaaccccagtggcacccaccgtggaaactctacagggttatc
agtgggcatcttggctgggttcggtgtattgctgtggaacctggaaatcagtggttcgtt
actggatctgctgacagaactataaagatttgggacttggccagtggcaaattaaagctg
tcattgactggccacatcagcacagtacgcggtgtgattgtgagcacgaggagcccttac
ttgttctcttgtggagaagacaaacaagtgaagtgttgggatcttgaatataacaaggtt
atacggcactatcatggccatctaagtgcagtgtatggtctggatttgcatccaacaatc
gatgtcctggtcacttgtagtcgagattctactgctcggatctgggatgtgagaactaaa
gccagtgtgcacactttgtctggacacacaaatgcagttgctaccgtgagatgccaagct
gcagagccacaaattattactggaagtcacgataccacaatacgattatgggatctggtg
gctggaaagacacgagtcacattgacgaatcataagaagtcagtcagggctgtggtctta
catccgctacattacacatttgcatctggttctccagataacataaagcagtggaaattc
cctgacggaggcttcattcagaatctctctgggcacaatgcaattattaacacgctggca
gtcaatacggatggagtacttgtatctggagctgacaatggcactatgcacctttgggac
tggagaactggctataattttcagcgcgttcatgctgctgtacagcctgggtctttggac
agtgaatcaggaatattcgcttgtgcttttgatcggtcagaaagtcggttactaacagct
gaagctgataaaaccattaaagtttacagagaggatgagactgcgacagaagaaactcac
ccagtcagctggaaaccagaaattatcaagagaaagagattttag

  All links  
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (33)   
   Pfam (33)   
All databases (50)   

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