KEGG   Rattus norvegicus (rat): 64301
Entry
64301             CDS       T01003                                 

Gene name
Smn1, Smn
Definition
(RefSeq) survival of motor neuron 1, telomeric
  KO
K13129  survival motor neuron protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  RNA transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    64301 (Smn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    64301 (Smn1)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    64301 (Smn1)
SSDB
Motif
Pfam: SMN TUDOR DUF1325
Other DBs
NCBI-GeneID: 64301
NCBI-ProteinID: NP_071954
RGD: 620755
Ensembl: ENSRNOG00000018067
Vega: OTTRNOG00000001091
UniProt: O35876
Position
2q12
AA seq 289 aa
MAMGSGGGAGSEQEDTVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDMCET
SDKPKGTARRKPAKKNKNQKKNATAPLKQWKAGDKCSAVWSEDGCVYPATITSVDLKRET
CVVVYTGYGNKEEQNLSDLLSPTCEVANNTEQNTQENESQVSTDDSEHSSRSLRSKAHSK
SKAAPWTSFLPPPPPVPGAGLGPGKPGLRFSGPPPPPPPPPPFLPCWMPPFPSGPPIIPP
PPPISPDCLDDTDALGSMLISWYMSGYHTGYYMGFRQNKKEGKKCSHTN
NT seq 870 nt   +upstreamnt  +downstreamnt
atggcgatgggcagcggcggcggcgcgggctctgagcaggaagacaccgtgctgttccgg
cgtggcaccggccagagtgatgattctgacatttgggatgatacagcattgataaaagct
tacgataaagccgtggcctcctttaagcatgctctaaagaacggtgacatgtgtgaaact
tcagataagccaaaaggcacagctagaagaaaacctgctaagaagaataaaaaccaaaag
aagaatgccacagctccattgaaacagtggaaagctggtgacaaatgctctgccgtttgg
tcggaagatggctgcgtttacccagctaccatcacgtcagttgaccttaagagagaaacc
tgtgtcgtggtttatactggatatggaaacaaagaggagcaaaacctatctgatctgctt
tccccgacctgtgaagtagctaacaatacagaacagaacactcaggagaatgaaagccaa
gtttccacagacgacagtgaacactcctccagatcgctcagaagtaaagcacacagcaag
tccaaagctgctccatggacctcgtttctccctccacctcccccggtgcccggggcggga
ttaggaccaggaaagccaggtctaaggttcagtgggccaccgccgccgccacctccccct
cccccgttcttgccgtgttggatgcctccgttcccttcaggaccaccaataattcctcca
ccccctcccatatctcccgactgtctggatgacacggatgctctgggcagtatgctaatc
tcttggtacatgagtggttaccacactggttactatatgggtttcagacaaaataaaaag
gagggaaagaagtgctcacatacaaattaa

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