KEGG   Rattus norvegicus (rat): 690512
Entry
690512            CDS       T01003                                 
Symbol
Ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4
  KO
K16601  tubulin polyglutamylase TTLL4 [EC:6.3.2.62]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    690512 (Ttll4)
   04812 Cytoskeleton proteins [BR:rno04812]
    690512 (Ttll4)
Enzymes [BR:rno01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.62  beta-tubulin-glutamate ligase
     690512 (Ttll4)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Tubulin polyglutamylase and associated proteins
   690512 (Ttll4)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Tubulin modification proteins
     Tubulin polyglutamylases
      690512 (Ttll4)
SSDB
Motif
Pfam: TTL ATPgrasp_YheCD ATPgrasp_ST
Other DBs
NCBI-GeneID: 690512
NCBI-ProteinID: NP_001414011
RGD: 1594742
Ensembl: ENSRNOG00000017129
Position
9:83670788..83706891
AA seq 1198 aa
MASAGTEHYSIGLRRGNSFKQRQPSGTVSASPSEKPSEVKVWSQAHQQVKPIWKLERKHV
GTLSAGLGTSLLGVPPQPAYFFCPSTLCSSGTTAVIAGHSNPCYLQSLPDLFSNTLLYRR
TNVRQKPYQQLESFCLRSNPSEKRSFSLPQKGLPVSVTANKATSSTVFPMAQPMASSPTD
PYLSLAAAGENPSRKSLSSAISGKIASPLSSYKPMLNNNSFMRPNSTKVPLSQATDGLKP
VSSPKIQPVSWHHSGGTGDCVPQPGDHKVPQSIATVLDDVTAPMAPSTPSTLNISTASVA
SSQCSQSNFRREAHPCGLDENTDSQSATKEVHFTEAVRKLAAKGFEKMPRQGYQFEQACF
VNPSFQWGLLNRSRRWKPLMGQRFPQEDIGLDSGILPGASDTLGLDSTVFCTKRISIHLL
ASHVHGLNPSPTCGSVVDPQLLGEDRAPVPPSSSLQPLGVAEVATRLSSVHLGQPGKEPE
EAKDLNSCSTKGDCSPTDLRPKQLEPEDSEDELGDGLEDSCSHDENEEEEGDSECSSLSV
VSPSESVAIISRNCVDLMSKSISNHEKVVRPALIYSLFPNVSPTIYFGTRDERVEKLPWE
QRRLLRWKMSTVTPNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSPGFRSIREHQKLNHF
PGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILPQDSKLLRKAWESSSRQKWIVKP
PASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYLF
SDGLVRFASCKYSPSMKSLSNKFMHLTNYSVNKKNAEYQANADETACQGHKWALKALWNY
LSQKGVNSDAIWEKIKDVVVKTIISSEPYVTNLLKLYVRRPYSCHELFGFDIMLDENLKP
WVLEVNISPSLHSNSPLDISIKGQMIRDLLNLAGFVLPNMEDILSSSSSPSSSSGSSTSL
PSSPREKCQMTPEHFTAQKMKKAYYLTQKVPDQDFYSSVLDVLTPDDVRVLVEMEDEFSR
RGQFERIFPSRISSRYLRFFEQPRYFNILTTQWEQKYHGNKLKGVDLLRNWCYKGFHTGI
VSDSAPLWSLPTSLMNASKGDGTPNAVSRSDHNKSRKKSCSEGNSEDGPTSKPKKSQAGL
SPISRKTLSSKNNENTSKQSKRSTQGLPVLKYSGQGSRLSASSASQSIADSLLTAVSP
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggcctcagcaggaacagagcactacagtattggcctgcgccgaggaaacagcttcaag
cagagacaaccctcaggcacagtgtctgcttcaccatctgagaaaccctcggaggtcaaa
gtctggtctcaggcccatcagcaggtgaagccaatctggaaactcgaaaggaagcacgta
ggcacactgtcagcagggctgggcaccagtctcctgggagtcccaccccagccagcctat
ttcttttgccctagcactttatgtagctctgggaccacagctgtcattgcaggccacagc
aatccctgttacctgcaatctctccctgacttgttcagcaatactctgctgtaccgccgc
accaacgtgaggcaaaaaccataccagcaactggaatctttctgcttgcgttccaaccca
tcagagaaaagatctttttctctccctcagaagggtctccctgtcagtgtcactgccaat
aaagccacatcttctacagtcttccccatggcccagcccatggcatcttcacccactgat
ccatacctctcactggcagcagctggggaaaatccttcaaggaagagcctgtcctctgcc
atctcagggaagattgcatctccactgtcctcctacaagcccatgctgaacaacaactcc
ttcatgaggccaaatagcactaaagtgcccttatcacaagccacagatggcctgaagcca
gtatcctcacccaagatccagcctgtctcatggcatcattcagggggtaccggagactgt
gtaccccaacctggtgaccataaggtgccccaaagcattgctaccgtcttagatgatgtc
actgcccctatggccccatctacccctagcaccctcaacatatccacagccagtgttgcc
tcttcccagtgcagtcagagtaactttaggagggaggcacatccctgtggcctggatgaa
aacacggattcccagagtgctactaaagaggtacacttcactgaggctgtgaggaagctg
gctgcaaaaggctttgagaagatgccacggcaaggctaccagtttgaacaggcttgtttt
gtgaaccccagcttccagtggggtcttctcaacagaagcaggcggtggaaacctctgatg
ggccagcggtttcctcaggaggatattggattagacagtgggatccttcctggtgcttca
gacaccttggggttggacagtacagtcttttgtaccaaaaggatcagcattcacctcctt
gcctcacatgttcatgggcttaaccccagtcctacctgtgggtctgtagttgacccccaa
ttacttggagaagacagagctcctgttcccccttcttcttccctccagcctcttggtgta
gctgaagtggccactcgtctttcttctgtccatcttggccagcctgggaaggaacctgag
gaagccaaggacctgaactcttgtagtactaagggtgattgttcacctactgacctcagg
ccaaaacagctggagcctgaagattcagaagatgaactgggagatggtttggaagacagc
tgcagtcatgatgagaatgaagaagaggaaggagactcagagtgctcttctttgagcgtt
gtgtcccccagcgagtcggtggcaataatatctcggaactgtgtggatttgatgtccaaa
tctatttcaaatcatgagaaagttgtgcggccagccctcatctacagtctcttccccaac
gtatcccctaccatctattttgggactcgggatgaaagagtggagaaactgccttgggaa
cagaggaggctacttcggtggaagatgagtacagtgacccccaacattgtcaagcagacc
atcggacggtcgcacttcaaaatcagcaagagaaatgatgactggctgggctgctggggt
caccacatgaagtctcctggttttcgatccattagagagcatcagaagctaaaccacttc
ccaggctccttccagattgggaggaaggaccggctgtggcggaacctgtctcgcatgcaa
agccgttttggcaagaaggagttcagtttctttcctcagtcctttatcttgccccaggat
tccaagctcttgcgcaaagcctgggagagcagcagccgccagaagtggattgtgaagcca
ccagcatctgctcgaggcattggcattcaggtcattcacaaatggagtcagctccccaag
cgcaggcccctcctggtacagaggtatctacacaagccctacctcattagtggcagcaaa
tttgatcttcggatctatgtttacgtgacttcttatgatcccctacggatttacctcttt
tcggatggactcgtccgctttgccagttgcaagtattccccttccatgaagagtcttagc
aacaagttcatgcacctgaccaactacagtgtcaataaaaagaatgcagagtaccaggcc
aatgctgatgagactgcatgccaaggccacaaatgggcgctgaaggctttgtggaactat
ctgagccagaaaggagtcaatagtgatgccatctgggaaaagataaaggatgttgttgtc
aaaaccatcatctcgtcagagccctatgtgaccaacctactgaagttatatgtgcgccgc
ccctatagctgccatgagctctttggttttgacatcatgctggatgagaacctgaaaccc
tgggtcctagaagtcaacatttctccaagcctccattccaattctcccctggacatcagc
atcaaaggccaaatgatccgagatctcctgaacctggcaggctttgttctgcccaacatg
gaggatatcctctctagttccagcagccccagcagctccagcggttccagcaccagtctg
ccaagctctcctagagaaaaatgtcaaatgactccagagcacttcactgcacaaaagatg
aagaaagcctattacctgacccagaaagttcctgaccaggacttctattcgtctgtgctg
gatgtcttgacaccagatgacgttcgggttttggtggagatggaagatgagttttctcgt
cgtggtcaatttgaaagaatttttccttcccgaatctcttctcgctatcttcgttttttc
gagcagccacgatatttcaacattctcaccacacagtgggaacagaagtaccatggaaac
aagctcaaaggagtagatctgcttcggaattggtgctacaaaggcttccacacggggatc
gtctctgactccgctccactgtggtctctgccaacatcgctcatgaatgcctcaaaaggt
gatgggacaccaaatgctgtcagcagatcagatcacaacaagtcaagaaagaaaagttgc
tccgagggaaactccgaagatgggcccacatctaagcccaagaagagtcaagctggcctg
tcccccatatccaggaagactttgtcctcaaagaacaatgagaacaccagcaaacagtcc
aagcgctctacccaggggttacctgtcctcaagtactctgggcagggctccagactctct
gcttcttctgcttcccagtcaattgctgactccctcctgactgctgtgagcccatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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