KEGG   Rattus norvegicus (rat): 79246Help
Entry
79246             CDS       T01003                                 

Gene name
Htr3a, 5-HT3, 5-HT3A, 5HT3, Htr3
Definition
(RefSeq) 5-hydroxytryptamine receptor 3A
  KO
K04819  5-hydroxytryptamine receptor 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04726  Serotonergic synapse
rno04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04726 Serotonergic synapse
    79246 (Htr3a)
  09157 Sensory system
   04742 Taste transduction
    79246 (Htr3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    79246 (Htr3a)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Serotonin (5-HT3)
   79246 (Htr3a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Motif
Other DBs
NCBI-GeneID: 79246
NCBI-ProteinID: NP_077370
RGD: 61818
Ensembl: ENSRNOG00000006595
UniProt: P35563 Q62999
Position
8q23
AA seq 483 aa AA seqDB search
MPLCIPQVLLALFLSVLIAQGEGSRRRATQAHSTTQPALLRLSDHLLANYKKGVRPVRDW
RKPTLVSIDVIMYAILNVDEKNQVLTTYIWYRQFWTDEFLQWTPEDFDNVTKLSIPTDSI
WVPDILINEFVDVGKSPSIPYVYVHHQGEVQNYKPLQLVTACSLDIYNFPFDVQNCSLTF
TSWLHTIQDINISLWRTPEEVRSDKSIFINQGEWELLGVFTKFQEFSIETSNSYAEMKFY
VVIRRRPLFYAVSLLLPSIFLMVVDIVGFCLPPDSGERVSFKITLLLGYSVFLIIVSDTL
PATAIGTPLIGVYFVVCMALLVISLAETIFIVQLVHKQDLQRPVPDWLRHLVLDRIAWLL
CLGEQPMAHRPPATFQANKTDDCSAMGNHCSHVGSPQDLEKTSRSRDSPLPPPREASLAV
RGLLQELSSIRHSLEKRDEMREVARDWLRVGYVLDRLLFRIYLLAVLAYSITLVTLWSIW
HYS
NT seq 1452 nt NT seq  +upstreamnt  +downstreamnt
atgccgctctgcatcccgcaggtgctgttggccttgttcctttccgtgctgatagcccag
ggagaaggcagccggaggagggccacccaggcccacagcaccacccagcctgctctgctg
aggctgtcagatcacctcctggctaactacaagaagggagtgcggcctgtgcgggactgg
aggaagcccaccctggtctccattgatgtcatcatgtatgccatcctcaacgtggatgag
aagaaccaggttctgaccacctacatatggtaccggcagttctggaccgacgagtttcta
cagtggactcctgaggacttcgacaatgtcaccaaattgtccatccccaccgacagcatc
tgggtccctgacatcctcatcaatgagtttgtggacgtggggaagtctccaagcattcct
tatgtgtatgtgcaccatcaaggtgaagtccagaactacaagcccctacagctggtgacc
gcctgtagccttgacatctataacttcccgttcgatgtgcagaactgctctctgaccttc
accagctggctgcataccatccaggacatcaacatttccctgtggcgaacaccagaagaa
gtgaggtcggacaagagcatcttcataaatcagggcgagtgggagctgctgggggtgttc
accaaatttcaggagttcagtatagaaaccagtaacagctatgcggaaatgaagttctac
gtggtcatccgccggcggcctttattctacgcagtcagcctcttgctgcccagtatcttc
ctcatggtcgtggacattgtgggcttttgtctgcccccggacagtggtgagagagtgtct
ttcaagatcacgctccttctgggatactcagtctttctcatcatcgtgtcagacacactg
cctgcaacggccatcggcactcccctcattggtgtctactttgtagtgtgcatggctctg
ctggtgataagcctcgctgagaccatcttcattgtgcagctggtgcataagcaggattta
cagcgccctgtacctgactggctgaggcacctggtcctagacagaatagcctggctgctc
tgcctaggggagcagcccatggcccataggcccccagccaccttccaagccaacaagact
gatgactgctcagccatgggaaaccactgcagccatgtcggaagccctcaggacttggag
aagacctcgaggagcagagatagccctcttccaccaccaagggaggcctcgctggctgtg
cgtggcctcttgcaagagctgtcctccatccgccactccctggagaagcgggatgagatg
cgggaggtggcaagggactggttgcgggtgggatatgtgctggacaggctgctgtttcgc
atctacctgctggccgtgctggcttacagcatcaccctggtcacgctctggtccatttgg
cattattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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