KEGG   Rattus norvegicus (rat): 83589
Entry
83589             CDS       T01003                                 

Gene name
Apba1
Definition
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
  KO
K04531  amyloid beta A4 precursor protein-binding family A member 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    83589 (Apba1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    83589 (Apba1)
 Endocytosis
  Clathrin-mediated endocytosis
   LDLR adaptor proteins
    83589 (Apba1)
Motif
Pfam: PID PDZ PDZ_6 PDZ_2 PRT6_C CATSPERG
Other DBs
NCBI-GeneID: 83589
NCBI-ProteinID: NP_113967
RGD: 620844
Ensembl: ENSRNOG00000014928
UniProt: O35430
Structure
PDB: 
4DBB

Position
1
AA seq 841 aa
MNHLEGSAEVEVADEAPGGEVNESVEADLEHPEVEEEQQPQPSPPPPAGHAPEDHRAHPA
PPPPPPPQEEEEERGECLARSASTESGFHNHTDTAEGDVLAAARDGYEAERAQDADDESA
YAVQYRPEAEEYTEQAEAEHAEAAQRRALPNHLHFHSLEHEEAMNAAYSGYVYTHRLFHR
AEDEPYAEPYADYGGLQEHVYEEIGDAPELEARDGLRLYERERDEAAAYRQEALGARLHH
YDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIVAEVKQSMSSQSLDKAAEDMPEAE
QDLERAPTPGGGHPDSPGLPAPAGQQQRVVGTPGGSEVGQRYSKEKRDAISLAIKDIKEA
IEEVKTRTIRSPYTPDEPKEPIWVMRQDISPTRDCDDQRPVDGDSPSPGSSSPLGAESSI
TPLHPGDPTEASTNKESRKSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKT
PSKNVRMMQAQEAVSRIKTAQKLAKSRKKAPEGESQPMTEVDLFISTQRIKVLNADTQEP
MMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEASHPSQDAKRQYKMICHVFESED
AQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKD
VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG
LPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGI
AERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVY
I
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgaaccacttggagggctccgcggaggtggaggtggccgacgaggcgccaggaggggag
gtgaacgagtccgtggaggccgacctggagcaccccgaggtggaggaagagcagcagccg
cagccgtcgcccccgccgcccgcaggtcacgcacccgaggaccaccgcgcgcatccggcg
ccgccgccgccgccaccaccgcaggaggaggaggaggagcgcggcgagtgcctggctcgc
tcggccagcaccgagagcggcttccacaaccacacggacaccgctgagggcgacgtgctc
gccgcggcccgagacggctacgaggcggagcgcgcgcaggacgccgacgatgagagcgcc
tacgccgtgcagtaccggcccgaggccgaggagtacacggagcaggcggaggccgagcac
gccgaggcggcgcagcggcgcgcgctgcccaaccacctgcacttccactcgctggagcac
gaggaagccatgaacgccgcctactcgggctatgtctacacgcaccggctcttccaccgc
gccgaggacgagccctacgccgagccctacgccgactacggcggcctccaggagcacgtg
tacgaggagatcggggacgcgcctgagctggaggcgcgcgacggcctgcggctctatgag
cgggagcgcgacgaggcggccgcctaccgccaggaggccctaggcgcgcggctgcaccac
tacgacgagcgctccgacggcgagtccgacagccccgagaaggaggcggagttcgcgccc
tacccgcgcatggacagttatgagcaggaagaggacatcgaccagatcgtggccgaggtc
aagcagagcatgagctcgcagagcctcgacaaggcggccgaagacatgcccgaggcggag
caggacctggagcgcgccccgaccccgggagggggacaccccgacagccctgggctgcca
gcacctgccgggcagcagcagcgagttgtgggaaccccgggaggcagcgaggttggtcag
cggtacagcaaggaaaagagggatgccatctcgctggccatcaaggacatcaaggaggcc
atcgaagaagtgaaaaccaggaccatccgttcgccttacacccccgacgaacccaaagag
cccatctgggtcatgcgccaggacattagccccacaagggactgtgacgaccagaggccc
gtggacggagattctccgtctcctggcagttcctcacccctgggtgctgagtcatcaatc
acaccccttcatcccggtgaccccacggaagcctccactaataaagagtcaagaaaaagc
ttggcttcattcccaacctacgttgaagttcctggaccctgcgaccctgaagacttgatc
gatggaattatttttgctgccaattaccttggttccactcagctactctcagacaaaact
ccctccaaaaacgtgcgcatgatgcaggcccaggaagcagtaagccggatcaagacggcc
cagaaattagccaaaagcaggaagaaggctcctgaaggcgaatctcagccaatgactgag
gtggacctcttcatctccacccagaggatcaaagtgttgaatgcagatacacaggagcct
atgatggaccaccctctgaggaccatttcctacatcgcagacattgggaacatcgtcgtg
ctgatggcccgcaggcggatgccccgctccaactcccaggagaatgtggaggcctctcac
ccatcccaggatgcaaaacggcagtacaagatgatctgtcatgtctttgagtctgaggac
gcccagctgatcgcacagtccatcgggcaggccttcagcgttgcataccaggagttcctc
agggccaacgggattaacccagaagacctgagccaaaaggagtacagcgacctgctcaac
acccaggacatgtacaacgatgacctgatccacttctccaagtcggaaaactgcaaagat
gtcttcatagagaagcagaaaggagaaatcctgggagttgtgattgtggagtctggctgg
ggatccattctgccaaccgtgatcattgccaacatgatgcacggaggccccgccgagaag
tcggggaagctgaacatcggggaccagatcatgtccattaacggcaccagcctggtgggc
ctgcccctgtccacctgccagagcatcattaagggcttaaagaaccagtcccgcgtgaag
ctgaacatcgtgaggtgccccccagtgaccacagtgctaattaggaggccggaccttcgc
taccagctgggtttcagcgtgcagaatggaattatctgtagcctcatgagagggggaata
gctgagagaggaggtgtccgcgtgggacatcggatcattgaaatcaacggccagagtgtc
gtagccacaccacacgagaagatcgtccacatactctccaatgctgttggggagatccac
atgaagacaatgccagcagccatgtacagactgctgacagcccaggagcagcccgtttac
atctga

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