KEGG   Rattus norvegicus (rat): 83731
Entry
83731             CDS       T01003                                 
Symbol
Kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04022  cGMP-PKG signaling pathway
rno04270  Vascular smooth muscle contraction
rno04911  Insulin secretion
rno04924  Renin secretion
rno04970  Salivary secretion
rno04972  Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04022 cGMP-PKG signaling pathway
    83731 (Kcnma1)
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    83731 (Kcnma1)
   04924 Renin secretion
    83731 (Kcnma1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    83731 (Kcnma1)
  09154 Digestive system
   04970 Salivary secretion
    83731 (Kcnma1)
   04972 Pancreatic secretion
    83731 (Kcnma1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    83731 (Kcnma1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   83731 (Kcnma1)
SSDB
Motif
Pfam: BK_channel_a Ion_trans Ion_trans_2 TrkA_N Lig_chan
Other DBs
NCBI-GeneID: 83731
NCBI-ProteinID: NP_114016
RGD: 620715
Ensembl: ENSRNOG00000005985
UniProt: Q62976
Position
15:302078..1001198
AA seq 1243 aa
MANGGGGGGGGSSGSSGGGGGGGGGETALRMSSNIHANHLSLDASSSSSSSSSSSSSSSS
SVHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCC
HCGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRV
LVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDK
LWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIK
LVNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVY
AKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLE
SVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARV
KIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPS
WNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSN
EMYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRSRKRILINPGNHLKTQ
EGTLGFFIASDAKEVKRAFFYCKACHDDVTDPKRIKKCGCRRLIYSKMSIYKRMSRACCF
DCGRSERDCSCMSGRVRGNVDTLERNFPLSSVSVNDCSTSFRAFEDEQPPTLSPKKKQRN
GGMRNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSE
AAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWET
LHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKS
MQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQ
FLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPEL
EALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNM
LCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHS
SHSSQSSSKKSSSVHSIPSTANRPNRPKSRESRDKQKKEMVYR
NT seq 3732 nt   +upstreamnt  +downstreamnt
atggcaaacggtggcggcggcggcggcggcggcagcagcggcagcagcggcggcggcggc
ggcggcggcggaggcgagacggctcttagaatgagcagcaatatccacgcgaaccatctc
agcctagacgcgtcctcttcttcctcctcctcttcttcctcctcctcttcctcctcgtcc
tcggtccacgagcccaagatggatgcgctcatcatcccggtgaccatggaggtgccgtgc
gacagccggggccaacgcatgtggtgggctttcttggcctcctccatggtgactttcttc
gggggcctcttcatcatcttgctctggcggactctcaagtacctgtggaccgtttgctgc
cactgcgggggcaagacgaaggaggcccagaagataaacaatggctccagccaggcagat
ggtactctcaagccagtggatgaaaaagaggaggtggtggcagccgaggtcggctggatg
acatctgtgaaggactgggcaggggtgatgatatctgcccagacactgactggcagagtc
ctggttgtgttagtctttgctctcagcattggtgcccttgtaatatacttcatagactca
tcaaacccaatagaatcctgccagaatttctacaaagatttcacattacagatcgacatg
gctttcaacgtgttcttccttctctactttggcttgcggtttattgcagccaatgataag
ctgtggttctggctggaagtgaattctgtagtagatttcttcacagtccctcccgtgttt
gtgtctgtatacttaaacagaagttggcttggcttgagatttttaagagctctcagactg
attcagttttcagaaattttgcagtttctgaatatccttaaaacaagtaattccatcaag
ctggtgaacctgctctccatatttatcagcacgtggctgactgcagctggattcatccac
ttggtggagaattcaggggacccatgggaaaatttccaaaacaaccaggcacttacgtac
tgggaatgtgtctacttactcatggtcacaatgtctacagtgggttacggggatgtttat
gcaaaaaccacgcttggacgcctcttcatggtcttcttcatcctcgggggactggccatg
tttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatacgggggc
tcctatagcgcggttagtggaagaaagcacattgtagtctgtgggcacattactctggag
agtgtctctaacttcctgaaggactttctgcacaaggaccgggatgatgtcaacgtggag
attgtttttcttcacaacatctcccctaaccttgagcttgaggctctgttcaaacggcat
ttcactcaggtggagttttatcagggctctgtcctcaatccacacgatcttgccagagtc
aagatagagtcagcagatgcatgtttgatccttgccaataagtactgcgctgacccggat
gcagaagatgcctccaacatcatgagagtgatctccataaagaactaccacccaaagatc
aggatcatcactcagatgctgcagtatcacaacaaggcccatctgctcaacatccccagc
tggaactggaaagagggtgatgacgcaatatgccttgcagagctcaagttgggtttcata
gcccagagctgtctggctcaaggcctctccacaatgcttgccaatctcttctctatgagg
tcattcataaagattgaggaagatacatggcagaaatactacttggaaggagtctccaat
gaaatgtacacagaatatctttccagtgccttcgtgggtctgtccttccctactgtttgt
gagctgtgttttgtgaagcttaagctcctgatgatagccattgagtacaagtctgccaac
agggagagccgaagccgaaagcgaatattaattaaccctgggaaccaccttaagacccaa
gaaggtactttaggatttttcatcgcaagtgatgccaaagaagttaaaagggcatttttt
tactgcaaggcctgtcatgatgacgtcacagatcccaaaagaattaaaaaatgcggctgc
aggcggctgatctattccaagatgtccatctacaagagaatgagccgagcatgttgtttt
gattgcggacgttctgagcgtgactgctcgtgcatgtcaggccgtgtgcgtggtaacgtg
gacacccttgagagaaacttcccgctttcttctgtctctgttaatgattgctccaccagt
ttccgtgcctttgaagatgagcaaccgccaacactgtcaccaaaaaaaaaacaacgtaat
gggggcatgaggaactcacccaacacatccccgaagctgatgaggcatgaccccttgtta
attcctggcaacgatcagattgacaacatggactccaatgtgaaaaagtacgactccact
ggaatgtttcactggtgcgcacccaaggagattgagaaagtcatcttgactcgaagtgaa
gctgccatgactgtcctgagtggtcatgttgtagtctgcatctttggggatgtcagctca
gccctgattggcctccggaacctggtgatgccgcttcgtgctagcaattttcactatcat
gagctcaaacacattgtgtttgtgggctccatcgagtacctcaagcgggagtgggaaaca
ctgcacaacttccccaaagtatccatattgcctggtacgccattaagtcgggctgattta
agggctgtcaacatcaacctctgtgacatgtgcgttatcctgtcagccaatcagaataat
attgatgatacttcgcttcaggacaaggaatgcatcttggcgtcactcaacatcaaatct
atgcagtttgatgacagcatcggggtcttgcaggctaattcccaaggattcacacctcct
ggaatggacagatcatcacctgacaacagcccagtgcacgggatgttacgccagccgtcc
atcacaaccggagtcaacattcccatcatcacggaactcgtgaacgatactaatgttcag
tttttggaccaagatgatgatgatgaccctgacacagagctgtacctcacacagcccttt
gcttgtgggacagcatttgccgttagcgtcctggactcactcatgagcgcgacatacttc
aatgacaatatcctcaccctaatacggaccctggtgacaggaggagccacgccagagctc
gaagctttaatagctgaggagaatgcacttcgagggggttacagcactccgcagacacta
gccaacagggaccgctgccgagtggcccagttagccctgttggatgggccctttgcggac
ttaggggatggtggttgttatggtgatctgttctgcaaagctctgaaaacatataacatg
ctttgttttggaatttaccggctgagagatgcccacctcagcacccccagccagtgtaca
aaaaggtacgtcatcaccaatcccccctacgagtttgaacttgtaccgacagacctgatc
ttctgcctgatgcagtttgaccacaacgctggccaatcccgggccagtctgtctcattcc
tcccactcctcacagtcgtccagtaagaagagctcctctgtccactccatcccgtccaca
gcaaatcggccaaaccggcccaagtccagggagtcccgcgacaaacagaaaaaagaaatg
gtttacagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (42)   
   RefSeq(nuc) (4)   
   GenBank (19)   
   EMBL (19)   
Protein domain (5)   
   Pfam (5)   
All databases (68)   

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