KEGG T01003: 84382

Rattus norvegicus (rat): 84382

Entry

84382             CDS       T01003

Symbol

Tcf4

Name

(RefSeq) transcription factor 4

K15603

transcription factor 4/12

Organism

rno Rattus norvegicus (rat)

Brite

KEGG Orthology (KO) [BR:rno00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    84382 (Tcf4)
Transcription factors [BR:rno03000]
Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    84382 (Tcf4)

SSDB

Motif

Pfam:

HLH

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

UniProt:

Position

18:65216840..65563186

AA seq 664 aa
MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWG
NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRENVQGC
HQSLLGGDMDMGNPGTLSPTKPGSQYYPYSSNNARRRPLHSSTMEVQTKKVRKVPPGLPS
SVYAPSASTADYNRDSPGYSSSKPAASTFSSSFFMQDGHHSSDPWSSSSGMNQPGYGGML
GNSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGT
DSIMANRGTGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWS
RNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAVPGGHGDMHGIIG
PSHNGAMGSLGSGYGTGLLSANRHSLMVGAHREDGVALRGSHSLLPNQVPVPQLPVQSAT
SPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKS
ITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTK
LLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDAANH
MGQM

NT seq 1995 nt +upstreamnt +downstreamnt
atgcatcaccaacagcgaatggctgccttagggacggacaaagagctgagtgatttactg
gatttcagtgcgatgttttcgcctcctgtaagcagtgggaaaaatggaccaacttctttg
gcgagtggacattttacgggctcaaatgtagaagacagaagtagctcagggtcctggggg
aatggaggtcatccaagcccgtccaggaactatggagatgggactccctatgaccacatg
actagcagggatcttgggtcacatgacaatctctctccaccttttgtcaattccagaata
caaagtaaaacagaaaggggttcatactcatcttatgggagagaaaacgtacagggttgc
caccagagtctcctcggaggggacatggatatgggcaacccaggaaccctttcgcccacc
aaacctggctcccagtactacccatattccagcaataacgcccgacggaggcctcttcac
agtagtaccatggaggtgcagacaaagaaagtcagaaaagttcctccaggcttgccatct
tcagtctacgctccttcagccagcactgccgactacaacagggactcaccaggctattct
tcctccaagccagcagccagcactttctccagctccttcttcatgcaagatggccatcac
agcagtgacccttggagctcctccagtggaatgaatcagcccggctatggagggatgcta
ggcaactctcatatcccacagtctagcagctactgtagcctgcatccacatgaacgtctg
agctatccatcgcactcctcggcagacatcaactccagtcttcctccgatgtccacgttc
catcgaagtggcacaaaccattacagcacctcttcctgcacacctcctgccaacggaaca
gacagtataatggcaaacagaggaactggggcagcaggcagctcccagactggagacgct
ctggggaaagccctggcttcgatctattctcctgatcacacgaacaacagcttctcctcc
aacccttcaactcctgttggctcccctccttcactctcagcaggcacagctgtttggtct
cgaaacggaggacaggcctcgtcatctcccaattacgaaggacccttgcactccttgcag
agccgaattgaagaccgtttagaaagactggacgacgcgattcatgttctccggaaccac
gcggtgggcccatccacagctgtgcccggtggccatggggacatgcatgggatcatcgga
ccctctcacaatggagcaatgggcagtctgggctcaggatatggaactggccttctctca
gccaacagacattcactcatggtcggggcccaccgtgaagatggcgtggcactgagaggc
agccattctctcctgccaaaccaggttccggttccacagcttccagtccagtctgcaact
tcccctgacttgaacccaccccaagacccttacagagggatgccaccaggcctccaggga
cagagtgtgtcttccggcagctctgagatcaagtccgacgacgagggcgatgagaaccta
caggacacaaaatcttccgaggacaagaaactagacgacgacaagaaggatatcaaatca
attactagcaataacgatgatgaggacctgaccccggagcagaaggccgagcgtgagaag
gagcggaggatggccaataacgcccgtgagcgcctgagggtccgtgatatcaacgaggct
ttcaaggagctgggccgcatggtacagctccacctgaagagcgacaagccccagaccaag
ctcctgattctccaccaggcagtggctgtcatcctcagcctggagcagcaagtgcgagaa
aggaacctgaacccaaaagctgcctgtctgaaaagaagggaggaagagaaggtgtcctca
gagcctcccccgctctccttggctggcccacaccctgggatgggagacgcagcgaatcac
atgggtcagatgtga

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (63)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (61)   
DNA sequence (77)   
   RefSeq(nuc) (61)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (146)   

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