KEGG   Rattus norvegicus (rat): 84382Help
Entry
84382             CDS       T01003                                 

Gene name
Tcf4
Definition
(RefSeq) transcription factor 4
  KO
K15603  transcription factor 4/12
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    84382 (Tcf4)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    84382 (Tcf4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HLH
Motif
Other DBs
NCBI-GeneID: 84382
NCBI-ProteinID: NP_445821
RGD: 69271
Ensembl: ENSRNOG00000012405
UniProt: Q62655
Position
18q12.1
AA seq 585 aa AA seqDB search
MTSRDLGSHDNLSPPFANSRIQSKTERGSYSSYGRENVQGCHQSLLGGDMDMGNPGTLSP
TKPGSQYYPYSSNNARRRPLHSSTMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGY
SSSKPAASTFSSSFFMQDGHHSSDPWSSSSGMNQPGYGGMLGNSHIPQSSSYCSLHPHER
LSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGTGAAGSSQTGD
ALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSL
QSRIEDRLERLDDAIHVLRNHAVGPSTAVPGGHGDMHGIIGPSHNGAMGSLGSGYGTGLL
SANRHSLMVGAHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQ
GQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKAERE
KERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVR
ERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDTANHMGQM
NT seq 1758 nt NT seq  +upstreamnt  +downstreamnt
atgactagcagggatcttgggtcacatgacaatctctctccaccttttgccaattccaga
atacaaagtaaaacagaaaggggttcatactcatcttatgggagagaaaacgtacagggt
tgccaccagagtctcctcggaggggacatggatatgggcaacccaggaaccctttcgccc
accaaacctggctcccagtactacccatattccagcaataacgcccgacggaggcctctt
cacagtagtaccatggaggtgcagacaaagaaagtcagaaaagttcctccaggcttgcca
tcttcagtctacgctccttcagccagcactgccgactacaacagggactcaccaggctat
tcttcctccaagccagcagccagcactttctccagctccttcttcatgcaagatggccat
cacagcagtgacccttggagctcctccagtggaatgaatcagcccggctatggagggatg
ctaggcaactctcatatcccacagtctagcagctactgtagcctgcatccacatgaacgt
ctgagctatccatcgcactcctcggcagacatcaactccagtcttcctccgatgtccacg
ttccatcgaagtggcacaaaccattacagcacctcttcctgcacacctcctgccaacgga
acagacagtataatggcaaacagaggaactggggcagcaggcagctcccagactggagac
gctctggggaaagccctggcttcgatctattctcctgatcacacgaacaacagcttctcc
tccaacccttcaactcctgttggctcccctccttcactctcagcaggcacagctgtttgg
tctcgaaacggaggacaggcctcgtcatctcccaattacgaaggacccttgcactccttg
cagagccgaattgaagaccgtttagaaagactggacgacgcaattcatgttctccggaac
cacgcggtgggcccatccacagctgtgcccggtggccatggggacatgcatgggatcatc
ggaccctctcacaatggagcaatgggcagtctgggctcaggatatggaactggccttctc
tcagccaacagacattcactcatggtcggggcccaccgtgaagatggcgtggcactgaga
ggcagccattctctcctgccaaaccaggttccggttccacagcttccggtccagtctgca
acttcccctgacttgaacccaccccaagacccttacagagggatgccaccaggcctccag
ggacagagtgtgtcttccggcagctctgagatcaagtccgacgacgagggcgatgagaac
ctacaggacacaaaatcttccgaggacaagaaactagacgacgacaagaaggatatcaaa
tcaattactagcaataacgatgatgaggacctgaccccggagcagaaggccgagcgtgag
aaggagcggaggatggccaataacgcccgtgagcgcctgagggtccgtgatatcaacgag
gctttcaaggagctgggccgcatggtacagctccacctgaagagcgacaagccccagacc
aagctcctgattctccaccaggcagtggctgtcatcctcagcctggagcagcaagtgcga
gaaaggaacctgaacccaaaagctgcctgtctgaaaagaagggaggaagagaaggtgtcc
tcagagcctcccccgctctccttggctggcccacaccctgggatgggagacacagcgaat
cacatgggtcagatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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