KEGG   Rattus norvegicus (rat): 84400Help
Entry
84400             CDS       T01003                                 

Gene name
Prelp
Definition
(RefSeq) proline and arginine rich end leucine rich repeat protein
  KO
K08125  proline arginine-rich end leucine-rich repeat protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    84400 (Prelp)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class II
    84400 (Prelp)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_9 LRRNT
Motif
Other DBs
NCBI-GeneID: 84400
NCBI-ProteinID: NP_445837
RGD: 620226
Ensembl: ENSRNOG00000003120
Vega: OTTRNOG00000000638
UniProt: Q9EQP5
Position
13q13
AA seq 377 aa AA seqDB search
MRASFFWFLPLLLILASVAQGQPRPKPGIRRKPKPRPTPSFPQPHEPAEPTDLPPPLPPG
PPSVFPDCPRECYCPPDFPSALYCDSRNLRKVPIIPPRIHYLYLQNNFITELPVESFKNA
TGLRWINLDNNRIRKVDQRVLEKLPGLAFLYMDKNQLEEVPSALPRNLEQLRLSQNLISR
IPPGVFSKLENLLLLDLQHNRLSDGVFKADTFQGLKNLMQLNLAHNILRRMPPKVPPAIH
QLYLDSNKIETIPSGYFKDFPNLAFIRMNYNKLSDRGLPKNSFNISNLLVLHLSHNKISN
VPAISNKLEHLYLNNNSIEKINGTQICPSNLVAFHDFSSDLENVPHLRYLRLDGNFLKPP
IPLDLMMCFRLLQSVVI
NT seq 1134 nt NT seq  +upstreamnt  +downstreamnt
atgagggcatccttcttctggttccttccacttctcctcatcttggcctcagtggcccaa
ggccagccaagaccaaaacctgggattaggcgtaaacccaagccaaggcccacacccagc
tttcctcagccccacgagccagcagagcccacagacctgcctccaccccttcctcctggc
cctccatctgtcttccctgactgtccacgggaatgctactgcccgcctgacttcccatca
gccctctactgtgacagccgaaaccttcgcaaggtcccaatcatcccaccccgaattcac
tacctttatctgcagaacaacttcatcaccgagctccccgtagaatctttcaaaaatgcc
acaggcctcaggtggatcaacctggacaacaaccgcattcgcaaggtggaccagagagtg
ctggagaagctccctggcctggcattcctctacatggacaagaaccagctggaagaggtg
ccatcagctctgccccggaacctggaacagctgaggctaagccagaacctcatctccagg
atcccgcccggagtattcagcaagcttgagaaccttctgcttctggatctgcagcacaat
aggctgagcgacggagtcttcaaagccgacaccttccagggcctcaagaacctcatgcaa
ctcaatctggcccacaacatcctgagaaggatgccccccaaggtgcccccggccattcac
cagctctacctggacagcaataagatcgagaccattcccagcggatacttcaaggacttc
cccaaccttgccttcatccgcatgaactacaacaagctgtcggatcgagggctccccaag
aactccttcaacatctccaacttgctggtgctccacttgtcacacaacaagatcagcaat
gtgccggccatcagcaacaagctggaacacctgtacctcaacaacaatagcatagagaag
atcaatgggacccagatttgccccagcaacctagtggccttccatgacttctcctcggat
ctggaaaacgtgccacacctgcgctacctgcggctggatgggaatttcctgaagccaccc
atcccgttggacctcatgatgtgcttccgcctcctgcagtctgtggttatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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