KEGG   Rattus norvegicus (rat): 84509Help
Entry
84509             CDS       T01003                                 

Gene name
Ran
Definition
(RefSeq) RAN, member RAS oncogene family
  KO
K07936  GTP-binding nuclear protein Ran
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
rno03013  RNA transport
rno05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    84509 (Ran)
   03008 Ribosome biogenesis in eukaryotes
    84509 (Ran)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    84509 (Ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    84509 (Ran)
   03009 Ribosome biogenesis [BR:rno03009]
    84509 (Ran)
   03016 Transfer RNA biogenesis [BR:rno03016]
    84509 (Ran)
   03036 Chromosome and associated proteins [BR:rno03036]
    84509 (Ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    84509 (Ran)
   04031 GTP-binding proteins [BR:rno04031]
    84509 (Ran)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     84509 (Ran)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic Type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    84509 (Ran)
  Pre-60S particles
    84509 (Ran)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic Type
  tRNA transport factors
   tRNA export factors
    84509 (Ran)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic Type
  Centrosome formation and ciliogenesis proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     84509 (Ran)
   Spindle formation proteins
    84509 (Ran)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   84509 (Ran)
GTP-binding proteins [BR:rno04031]
 Small (Monomeric) G-proteins
  Ran Family
   Ran
    84509 (Ran)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Gtr1_RagA SRPRB G-alpha AAA_24 Pox_A32 AAA_7 ArgoMid Septin TsaE AAA_16 AAA_33
Motif
Other DBs
NCBI-GeneID: 84509
NCBI-ProteinID: NP_445891
RGD: 620367
Ensembl: ENSRNOG00000000938
UniProt: P62828
Position
12q13
AA seq 216 aa AA seqDB search
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
NT seq 651 nt NT seq  +upstreamnt  +downstreamnt
atggccgcccagggagagccgcaggtccagttcaagctcgtcctggtgggcgacggcggc
accgggaagacgacgttcgtgaagcgccacttgacgggcgagtttgagaagaagtatgta
gccaccctgggcgtggaggtgcacccgctcgtcttccataccaacagaggacccatcaag
ttcaacgtgtgggacacagccggccaggagaagttcgggggcctgcgcgatggctactac
atccaagcccagtgtgccattataatgtttgacgtaacatcaagagttacttacaagaac
gtacctaactggcatagagatctggtacgcgtgtgtgaaaacatccccattgtattgtgt
ggcaacaaagtggatattaaagacaggaaagtgaaggcaaaatctattgtctttcaccga
aagaagaatcttcagtactatgacatttctgccaaaagtaactacaactttgaaaagcct
ttcctctggcttgccagaaagctcattggagatcctaacttggagttcgttgccatgcct
gctcttgccccacctgaggtggtcatggacccagctttggcagcacagtacgagcatgat
ttagaggttgctcagacgactgcgctcccggatgaggatgacgacctgtga

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