KEGG   Rhodococcus opacus PD630: Pd630_LPD02194
Entry
Pd630_LPD02194    CDS       T03071                                 
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] GabD
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa00250  Alanine, aspartate and glutamate metabolism
roa00310  Lysine degradation
roa00350  Tyrosine metabolism
roa00650  Butanoate metabolism
roa00760  Nicotinate and nicotinamide metabolism
roa01100  Metabolic pathways
roa01120  Microbial metabolism in diverse environments
Module
roa_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:roa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    Pd630_LPD02194
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Pd630_LPD02194
   00310 Lysine degradation
    Pd630_LPD02194
   00350 Tyrosine metabolism
    Pd630_LPD02194
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    Pd630_LPD02194
Enzymes [BR:roa01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     Pd630_LPD02194
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     Pd630_LPD02194
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     Pd630_LPD02194
SSDB
Motif
Pfam: Aldedh DUF3102
Other DBs
NCBI-ProteinID: AHK29420
Position
complement(2333177..2334631)
AA seq 484 aa
MTDFERLRATLPTGLWIDGAQTDPIDGGTFPVYDPATGTLIADVADAGGKDAMRALDSAA
AVQEEWAATAPRQRSIILRSAWEKVIERTDDLALLMTMEMGKALPESRGEVNYGAEFLRW
FSEEAVRIQGRYTTSPSGSGRIMVTKVPVGPTLAVTPWNFPLAMGTRKIGPALAAGCTII
VKPAEDTPLTMLLLAEIFAEAGLPAGVLSVLPASNAAAVTEPLLADPRLRKVTFTGSTRV
GKILIEQSAQQVLRTSMELGGNAPFVVFDDADIDAAVEGAMAAKMRNGGEACTAANRLIV
ANSVREEFTTKLTDRIAALTVGPGSEDGTHVGPLVNEKQRRNVASLVDDAVAAGARVRTG
GKSVDGPGYFFQPTVLDEVPANARIVREEIFGPVAAITGFDTEAEGVAAANDTEYGLAAY
IYTQNVDRAFRVADKLESGMVGVNRGVISDVAAPFGGVKQSGLGSEGGTEGIEEYLETKY
VGFA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgactgatttcgaacggctccgcgccaccctgcccaccggtctgtggatcgacggtgcc
cagaccgacccgatcgacggcggcacgttcccggtctacgacccggccaccggaaccctc
atcgccgacgtcgccgatgccggtggcaaggacgcgatgcgcgcactggactccgctgcg
gcggtccaggaggaatgggcggcgaccgctccgcggcagcggtcgatcatcctgcgctcg
gcgtgggagaaggtcatcgagcgcaccgacgacctcgcgctgctgatgacgatggagatg
ggcaaggccctgccggagagccgcggcgaggtgaactacggcgccgagttcctgcgatgg
ttcagcgaggaagccgtccgcatccagggccgctacaccacgtcaccgtcgggcagcgga
cggatcatggtcaccaaggtcccggtcggacccaccctggccgtcacgccgtggaacttc
ccgctcgcgatgggcacccgcaagatcggccccgcgctcgccgccggctgcacgatcatc
gtcaagcccgccgaggacaccccgctcaccatgctgctgctcgccgagatcttcgccgag
gcaggcctgcccgccggtgtgctgtcggtgctgcccgcgtcgaacgccgccgccgtcacc
gaaccgctgctcgcggacccgcggctgcggaaggtgacgttcaccggatccacccgggtc
ggcaagatcctcatcgagcagtccgcccagcaggttctgcgcacctcgatggaactcggc
ggcaacgccccgttcgtggtgttcgacgacgccgacatcgacgccgcggtcgagggcgcg
atggccgcgaagatgcgcaacggcggcgaggcctgcaccgccgccaaccgcctgatcgtg
gccaactcggtgcgcgaggaattcaccaccaagctcaccgaccggatcgccgcactcacc
gtcggaccgggcagcgaagacggcacccacgtcggccccctcgtcaacgagaagcagcgc
cgcaacgtggcgtccctcgtcgacgacgccgtcgccgcgggcgcccgggtccgcaccggc
ggcaagtccgtcgacggtcccggctacttcttccagcccaccgtcctcgacgaggtgccc
gcaaatgcgcgcatcgtccgcgaggagatcttcggacccgtcgccgcgatcaccggtttc
gacaccgaggccgagggcgtcgccgccgccaacgacaccgaatacggtctcgccgcgtac
atctacacacagaacgtcgaccgtgcgttccgcgtcgccgacaagctcgagagcggcatg
gtcggcgtcaaccgcggcgtcatctccgacgtcgccgcgccgttcggtggagtcaagcag
tccggcctcggcagcgaaggcggcaccgaaggcatcgaggagtacctcgagaccaagtac
gtcggcttcgcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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