KEGG   Rhodococcus opacus PD630: Pd630_LPD05981
Entry
Pd630_LPD05981    CDS       T03071                                 
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa00260  Glycine, serine and threonine metabolism
roa00460  Cyanoamino acid metabolism
roa00630  Glyoxylate and dicarboxylate metabolism
roa00670  One carbon pool by folate
roa00680  Methane metabolism
roa01100  Metabolic pathways
roa01110  Biosynthesis of secondary metabolites
roa01120  Microbial metabolism in diverse environments
roa01200  Carbon metabolism
roa01230  Biosynthesis of amino acids
roa01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:roa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Pd630_LPD05981
  09102 Energy metabolism
   00680 Methane metabolism
    Pd630_LPD05981
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Pd630_LPD05981
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Pd630_LPD05981
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Pd630_LPD05981
Enzymes [BR:roa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Pd630_LPD05981
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AHK33172
Position
6196935..6198254
AA seq 439 aa
MDTAHLTEVAAANPTLTHSLADLDPAVHQAIAAELERQQGTLEMIASENFAPLAVMQAQG
SVLTNKYAEGYPGRRYYGGCEHVDVIEQLAIDRLTALFGATFANVQPHSGAQANAAAMSA
LLKPGDGILGLDLAHGGHLTHGMKLNFSGKLYDVAAYHVREDDHLVDMDEVERLAREHRP
KLILAGWSAYTRQLDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVVTSTT
HKTLGGPRGGVILTNDEALAKKFNSSVFPGQQGGPLEHVIAGKAVSFKLAAEPEFRERQE
RTLAGAKILADRLLEDDSRQAGINVVSGGTDVHLVLVDLRESELDGKQAEDRLHRVGITV
NRNAVPFDPRPPMVSSGVRIGTPALATRGFDLDAFTEVADIISYALRPATDETGLDELRG
RVDALALRFPLYPDLTEAN
NT seq 1320 nt   +upstreamnt  +downstreamnt
gtggacaccgcacacctcaccgaggtggcagcagcgaacccgacgctgactcattcgctc
gccgatctcgaccccgccgtgcaccaggcgatcgcggccgagctcgagcgacagcagggc
accctggaaatgattgccagcgagaacttcgccccgctcgcggtgatgcaggcgcagggg
tcggtgctgacgaacaagtacgccgagggataccccggacgccgctactacggcggttgc
gagcacgtcgacgtcatcgagcagctcgccatcgaccgcctcaccgcgctcttcggtgcg
acattcgccaacgtgcaaccgcactccggagcgcaggccaacgccgccgcgatgtcggca
ctgctgaagcccggcgacggcatcctcggtctggacctcgcgcacggcggtcacctcacg
cacgggatgaagctgaacttctccggcaagctctacgacgtcgccgcgtaccacgtccgc
gaggacgatcatctcgtcgacatggacgaggtggagcgtctggcccgtgagcaccgcccg
aagctgatcctcgccggctggtccgcctacacacgccagctcgacttcgccgcgtttcgt
cgcatcgccgacgaggtcggcgcgtacctcatggtcgacatggcgcacttcgccggactc
gtcgccgccggactgcatccctcccccgtcccgcacgcccacgtggtcacgtcgacgacg
cacaagaccctcggcggtccccgcggcggcgtcatcctcaccaacgacgaggcactggcg
aagaagttcaactcctcggtgttccccggacaacagggcggcccgctcgagcacgtgatc
gccggcaaggccgtctcgttcaagctcgccgccgagcccgaattccgggagcgccaggaa
cgcacgctcgccggcgcgaagatcctcgccgaccgcctcctcgaggacgactcccggcag
gccggcatcaacgtcgtcagcggcggcaccgacgtgcatctggtgctggtggatctgcgc
gagtccgaactcgacggcaagcaggccgaggaccggttgcaccgggtgggaatcacggtg
aaccgcaacgcggtcccgttcgacccacgtccgccgatggtcagctccggggtgcggatc
ggcacccccgcgctcgccacccgcggtttcgacctggacgcgttcaccgaggtcgccgac
atcatcagctacgcgctgcgaccggccaccgacgagaccggactcgacgaactccgcggc
cgcgtcgatgccctcgcgctgcgcttcccgctctaccccgacctcacggaggcgaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system