KEGG   Rhodococcus opacus PD630: Pd630_LPD16017
Entry
Pd630_LPD16017    CDS       T03071                                 
Name
(GenBank) Uncharacterized protein y4yA
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa00300  Lysine biosynthesis
roa00470  D-Amino acid metabolism
roa01100  Metabolic pathways
roa01110  Biosynthesis of secondary metabolites
roa01120  Microbial metabolism in diverse environments
roa01230  Biosynthesis of amino acids
Module
roa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:roa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pd630_LPD16017
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pd630_LPD16017
Enzymes [BR:roa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Pd630_LPD16017
SSDB
Motif
Pfam: Orn_Arg_deC_N Ala_racemase_N
Other DBs
NCBI-ProteinID: AHK35976
Position
p8:complement(15847..17223)
AA seq 458 aa
MNRLQSVRLPPLTTPWTDAVTGDARLLRSVSDAFGGPVHLLDPARFTANTRDFAAAFDDA
AVTGSVYFGKKANKASAFVDAIADLVTDDRRSGRSRRFGIDVASAGEFRQALAAGVRGVD
LLVTGPHKPAELLTLAVRHDAIVTVDSPTELKSLADLSRGLKVRIMLRVLPPGSTSRFGM
TDDEVVFAEKLATERKNDITLVGYSFHLSGYSIGDRRDQAHRLIERIRAVRRSGLAPTTI
SIGGGLPISYVQHEHWQQFLDPQAGHIFHAGKTFESYYPYHSATTGAAALRAILTETDSG
GAPLAHVCQDNDISMFVEPGRALLDRAGITVFPVLGVKDRNPGIIVIDGTSLSLSEQWFD
TEFVPDPQLVSEHTPMNELPFFASVGAATCLESDMLTWRVIEFPYRPATGSYLVYHNTAG
YQMDSNESAFHDTPVPPKVVVTLDDGHPRWTLDRRETY
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgaaccgcctgcagtcggtacgactgccaccgttgaccacgccgtggaccgacgccgtc
accggcgacgcccggctgctgcgctcggtgtcggacgcgttcggcggccccgtccacctc
ctcgaccccgcgcgattcaccgccaacacgagggatttcgccgccgcattcgacgacgcc
gccgtcaccggctccgtgtacttcgggaagaaagccaacaaggcgtccgccttcgtcgac
gcgatcgccgacctcgtcaccgacgaccgccgcagcgggcgcagtcgccggttcgggatc
gacgtggccagcgccggcgagttccgccaggcactggcggcaggggtgcgcggggtggat
ctgctggtcaccggaccccacaagccggccgaactcctcaccctcgccgtgcgtcacgac
gcgatcgtcaccgtcgattcacccaccgagctcaagtccctcgccgacctctcacggggg
ctgaaggtccgcatcatgctgcgggtgcttcccccgggcagcaccagccggttcgggatg
accgacgacgaggtcgtgttcgcggagaagctggccaccgaacggaaaaacgacatcacc
ctggtcggttacagcttccacctgtccggatacagcatcggtgaccgccgcgaccaggcg
caccggttgatcgagcgcatcagggcggtccgccgctccggccttgcccccaccacgatc
agtatcggcggtggccttccgatcagctatgtgcagcacgagcattggcagcagttcctg
gacccgcaggccgggcacatcttccacgccgggaagacgttcgagagctactacccgtac
cattcggccaccaccggcgccgccgcacttcgggcgatcctcaccgagactgattccggc
ggcgccccgctcgcccacgtgtgccaggacaacgacatctcgatgttcgtcgaaccgggc
cgtgcgttgctcgaccgcgccgggatcaccgtctttccggtcctcggggtgaaggaccgc
aaccccgggatcatcgtcatcgacggcaccagcctgtccctgtccgagcagtggttcgac
accgagttcgtccctgaccctcaactggtctccgaacacacccccatgaacgagttaccg
ttcttcgcctcggtgggtgccgcgacgtgtctggagtcggacatgctcacctggcgggtg
atcgagttcccgtaccgccccgccaccgggtcctacctcgtctaccacaacaccgccgga
taccagatggactcgaacgaatccgcattccacgacaccccggtccccccgaaggtcgtg
gtgaccctcgacgacggacacccccgatggaccctcgaccgccgcgaaacctactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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