KEGG   Roseovarius sp. THAF27: FIU89_12685
Entry
FIU89_12685       CDS       T06352                                 
Symbol
xthA2
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
roh  Roseovarius sp. THAF27
Pathway
roh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:roh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FIU89_12685 (xthA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roh03400]
    FIU89_12685 (xthA2)
Enzymes [BR:roh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FIU89_12685 (xthA2)
DNA repair and recombination proteins [BR:roh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FIU89_12685 (xthA2)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QFT81472
UniProt: A0A5P9H0A4
Position
complement(2516411..2517199)
AA seq 262 aa
MPFTLATWNINSVRLREPIVLKLLQEEAPDILCLQECKSPVEKIPLEGFAALGYPYVIAR
GQKGYNGVAILSKLPIRDVGERDFAALGHARHVAGELENGVVIHNFYVPAGGDVPDREVN
LKFGQKLDYLTEMRDWFREDRPQKSILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVEHL
TNAQEAGNWTDVTRADIPEGQLYSWWSYRAKDWDAADKGRRLDHVWASDDLKSAAHSSRI
LRAARGWEKPSDHAPVFATFDL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgcccttcacccttgccacctggaacatcaactcggtccgcctgcgcgaacctatcgtc
ctgaaactgttgcaggaggaggcgccggatatcctgtgcctacaggagtgcaagtcgccg
gtcgagaagatcccgctggaggggttcgcggcccttggctatccctacgtgatcgcgcgc
gggcagaagggctataacggtgtggcgatcctgtcgaagctgcccatccgcgatgtgggc
gagcgggatttcgcggcgctgggccatgcgcgccacgtggccggagagcttgagaacggt
gtggtgattcacaacttctatgtgcccgcgggcggcgatgtgccggaccgcgaggtgaac
ctgaagttcgggcagaagctcgactacctgaccgagatgcgcgactggttccgcgaggac
aggccgcagaaatccatcctcgtgggcgacctcaacatcgccccgcgcgaggacgatgtc
tggagccacaagcaactgctgaaggtggtgagccacacgccggtcgaggtggagcatctg
accaacgcgcaggaggccggaaactggaccgacgtcacccgcgcggacattcccgaaggg
cagctttacagctggtggtcgtaccgggccaaggattgggacgcggccgacaagggccgg
cgcctggatcatgtctgggccagtgacgacctcaagtccgcagcgcattccagccgcatt
ctcagggccgcgcgtggttgggaaaagccatcggaccatgcgccggtcttcgcgacgttc
gacctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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