KEGG   Roseovarius sp. THAF27: FIU89_14655
Entry
FIU89_14655       CDS       T06352                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
roh  Roseovarius sp. THAF27
Pathway
roh03410  Base excision repair
roh03430  Mismatch repair
roh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:roh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FIU89_14655 (recJ)
   03430 Mismatch repair
    FIU89_14655 (recJ)
   03440 Homologous recombination
    FIU89_14655 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roh03400]
    FIU89_14655 (recJ)
DNA repair and recombination proteins [BR:roh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FIU89_14655 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FIU89_14655 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FIU89_14655 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: QFT81862
UniProt: A0A5P9H1B2
Position
2892337..2894079
AA seq 580 aa
MSFLGVARSLTDRCWVGPTPAIDRLAEAMAQETALPRPLCQTLCRLDVAPSDATTYLEPK
LRDLMPDPRSLKDMETAAARFLAAVERNEKIAVFADYDVDGGCSAALLIDWLRQMGRSAT
LYVPDRIDEGYGPNAPAMTELAAAHDLILCVDCGTLSHDALAAVTSADVLVLDHHLGGES
LPPALAVVNPNRQDESGDLAHLCAAAVVFLMLVEAGRQLREAGKPGPDLMAMLDLVALAT
VADVAPLRDVNRAFVRTGLAVMGKRLRPGLVALCDIGRVNTAPSSYHLGFVLGPRVNAGG
RVGRADLGARLLACTDPAEAISLAEKLDELNTERRDVETVVRAAALDQAETRGLDAPLVW
AAGDGWHPGVVGIVASRLKEATNRPAIVIGFDGDEGKGSGRSVSGVDLGHAIQRLAAEGL
LLKGGGHKMAAGLTVARANLEAAMDRLSELLARQGAGSTGPADLTLDGILMPGAASPELV
NQIENAGPFGAGAPGPRYAFPDMTIGFAKRVGESHLKLRFGDGTGANLDAIAFGAYDTLL
GKTLEEHGGQRFHLAGRLDINSWGGRQTVQLRLEDAALAG
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgagctttctgggcgtcgcacgctctttgaccgaccgctgctgggtcggcccaacgccg
gcaatagaccggctggcagaagcaatggcgcaagagacggcacttccgcgcccgctttgc
cagacgctctgccgtctcgacgtggctccatccgatgccacgacctaccttgagcccaag
ctgcgcgatctaatgcccgacccccgcagcctcaaggacatggaaaccgccgcggcgcgc
tttctcgccgcggtcgagcggaacgagaagatcgccgttttcgccgattatgatgtcgat
gggggctgttctgctgccttgctgatcgactggcttcggcagatgggacgctccgcaacg
ctttacgttcccgaccgcatcgacgagggctatgggccgaacgctccggccatgaccgaa
ttggcggcggcccatgacctcatcctgtgtgtcgattgcggcacgctcagtcatgacgcg
cttgcagcggtcacaagcgccgacgttctggtcctcgatcaccatctgggcggcgaaagc
cttccgcccgcattggcggtcgtcaatccgaaccggcaagatgaaagcggcgacctggcg
cacctctgcgctgccgccgtggtgttcctcatgctggtcgaagccggtcgccaattgcgc
gaagccggaaaaccgggcccggacctgatggcgatgctcgatctggtggcccttgccact
gtcgcggacgtggcgccgctgcgcgacgtcaatcgcgcgttcgtgcgaacgggcctcgcg
gtcatgggcaaacgccttcgccccgggcttgtggcgctgtgcgatatcggacgcgtcaat
accgccccgtcctcgtatcacctgggctttgttcttggcccccgtgtcaatgccggcggc
cgggtgggccgcgctgatctcggcgctcgcctgcttgcctgcaccgatccggccgaggcc
atctccctggccgaaaagctcgacgaactgaacaccgaacgccgcgatgtcgaaaccgtc
gttcgggccgcggcgctggaccaagctgaaacccgcggtctcgatgcaccactcgtctgg
gcagcgggtgacggatggcaccccggcgttgtcggcatcgtcgcctcgcgtctgaaggaa
gccacgaaccgcccggccatcgtgatcggattcgacggcgacgagggaaagggctctggc
cgatccgtttcgggcgtcgacctgggccacgccattcaacgcctggccgccgaaggcctt
ttgctgaaaggcggagggcacaaaatggcagctggccttacggtcgcacgcgccaacctt
gaggcggctatggaccggctgtcagaattgcttgcgcgacaaggcgccggatcgaccggg
ccggcggatcttaccttggacggtattctgatgcccggcgccgcgtccccggaactggtc
aatcaaatcgagaacgcaggcccctttggcgccggcgctcccggcccgcgctacgcgttc
ccggacatgacgatcggtttcgccaaacgcgtaggcgaaagccacctgaagctacgcttc
ggcgacggcaccggtgcgaacctcgacgccatagcgttcggtgcctacgataccctattg
ggaaagaccctggaagagcatggtggccaacgctttcatctggcgggacgcctcgacata
aacagctggggcggacgtcagactgtccaacttcgcctcgaggacgcggctttggcgggc
tga

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