KEGG   Rosistilla oblonga: CA51_21570
Entry
CA51_21570        CDS       T06941                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
rol  Rosistilla oblonga
Pathway
rol02020  Two-component system
rol02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CA51_21570 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CA51_21570 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rol03021]
    CA51_21570 (rpoN)
Transcription machinery [BR:rol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CA51_21570 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_23 HTH_Crp_2 LacI LEM HTH_Tnp_ISL3 HTH_21 MarR HTH_38
Other DBs
NCBI-ProteinID: QDV12275
Position
2940687..2942171
AA seq 494 aa
MGFEQRQQQVQKLAPRMIQSMEILQLPLLALQERVEQEMNENPLLEIQDDDPQMPDDPEE
SYENPDAPSESERELVVDNDHDNQDDFERLLNMKNELPNTFDEPFRKSSNQMQEDGDRRH
DLMANAEAHPESLNDFLLHQLAELDIDTDVELMAERIISTLDARDGGYLRTPLSDLLPSN
HSPEDLELAKRALAVVQSLEPTGIAARDLSECLLLQLAPDVPYYEEMKTLITGHLEDIAG
NRLPAIQRKTGYSLDKIQKVKDELHSLNPKPGAAFMETYVPTVTPDVIVEQDEDGQYKVR
LDDDRVPTLFISEYYRQRLQDPSATTEEREYIKQKINGAQWLIDSIEQRRSTLTKVSQAI
VDHQKAFLDLGPEAIEPLKMQQIADRVGVHVTTVSRAVDDKWIQTARGILPLKRFFVGGT
QTEDGDDVAWDTIRIKLQEVIDNEDKSKPLSDEDIVKELKKHGMTVARRTVTKYRKKMGI
PSSRQRRDWMLENK
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgggctttgaacagcgtcaacaacaagttcaaaagctggccccgcggatgatccagtcg
atggagatcttgcagttgccgttgcttgcgctgcaggaacgtgtcgagcaggagatgaac
gaaaacccgttgctggagatccaggacgacgatccccagatgcccgacgatcccgaggaa
tcgtacgagaatcccgatgcgccaagcgaatcggaacgggagcttgtcgtcgacaacgat
cacgacaatcaggacgatttcgagcgcttgttgaacatgaaaaacgagctgcccaatacg
ttcgacgaaccgtttcgcaagtcgtccaaccagatgcaggaagatggcgatcggcggcac
gatctgatggccaatgcggaagcccaccccgaatcgctcaacgattttctgctccaccaa
ctcgccgaactcgatatcgataccgatgtcgaattgatggccgaacgcattatcagcacc
ctggatgcccgcgacggcggttatctgcggacgccgctaagcgatctattgccatcgaac
cattcgcccgaagatctcgaactggcgaagcgtgcgttggcggtggtccagtcgctcgaa
ccgaccggcatcgcggctcgcgatctctccgaatgcctgctgctgcaactcgctcccgac
gtgccgtattacgaagagatgaagacgctgatcaccgggcacttggaggatatcgccggc
aaccgcttgcccgcgatccaacgcaaaaccggctattcgctcgacaagatccaaaaggtc
aaagacgaactccattcgcttaaccccaagcccggggcggcgtttatggaaacctacgtc
cccaccgtcacgcccgatgtgatcgtcgaacaggacgaggatgggcagtacaaggtgcgg
ctggacgatgaccgcgttccgacccttttcatcagcgaatattatcgccagcggttgcag
gatccgtcggcgaccaccgaggagcgggagtacatcaaacagaagatcaacggtgcgcag
tggttgatcgattcgatcgaacaacgacgcagcacgttgacgaaagtttctcaggcgatc
gtcgatcaccagaaagcgttcctcgatctcggtcccgaagcgatcgaaccgctgaagatg
caacagatcgccgatcgcgtcggcgtgcacgtgacgacggtcagccgggctgtcgacgat
aaatggatccagaccgcgcgtggcatcctgccgctgaagcggttcttcgtcggcggcacg
caaaccgaagacggcgacgacgtcgcgtgggatacgatccgcatcaagctgcaagaagtg
atcgacaacgaggacaagagcaagccgttgagcgacgaggatatcgtcaaagagctgaag
aagcacggcatgacggtcgctcgccgaacggtcaccaagtaccgcaagaaaatgggaatc
cccagcagccgccaacgtcgcgattggatgctggagaacaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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