KEGG   Roseimicrobium sp. ORNL1: G5S37_09240
Entry
G5S37_09240       CDS       T06460                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
roo  Roseimicrobium sp. ORNL1
Pathway
roo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:roo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G5S37_09240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roo03400]
    G5S37_09240
Enzymes [BR:roo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G5S37_09240
DNA repair and recombination proteins [BR:roo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G5S37_09240
SSDB
Motif
Pfam: DNA_ligase_A_M mRNA_cap_enzyme Cas9_Topo
Other DBs
NCBI-ProteinID: QIF01699
UniProt: A0A6G6K2M5
Position
complement(2298289..2299026)
AA seq 245 aa
MAKTPRRSAKAGKVSPPPRNGATPRSREVADPPAPAPAPAPSLDFIEPMLCLPVETLPKG
NWLYEIKWDGYRAQGIVERSRSRLLSRNGTSLAADFPDIAKALAKLDCWRAIVDGEIVAL
DETGRADFQQLQQKKNRTAAVRLVLFDLLHLDGEDLLDEPLEARRTLLQRLVRDAGPPLM
YSGELHGGPEALISSAAALRLEGIIAKKRGSRYLPDNRKGSWVKYQTERTEAKHLRYAQI
RSLKA
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcaaagactccgcggcgcagtgcgaaggctggcaaggtgagcccgccacctcggaac
ggcgccacgccccgctcgcgcgaggtcgccgacccacccgcacccgcacccgcacccgca
ccttccctcgactttattgagcccatgctctgcctcccggtggaaacgcttccgaagggt
aactggctttacgaaatcaagtgggacggatatcgggcccaaggcatcgtggagcgcagc
agaagccgcctgctgtcccgcaacggcacctccttggccgcagacttcccggacatcgcc
aaagccctggccaagctcgactgctggcgggccattgtggatggtgagatcgtggccctc
gatgaaacaggccgtgccgattttcagcagcttcagcagaagaagaaccgcaccgctgcg
gtgcgcctggtgctcttcgacctcttgcacctggatggcgaggatttgttggatgaaccc
cttgaagcacggcggacactcctgcaacgtctggtgcgcgatgccggcccgcccctcatg
tacagcggcgaactgcacggcggtccggaggccctcatcagctccgctgcagccttacgg
cttgaaggcatcattgcaaaaaagcggggcagtcgctacctgccggacaatcgcaaaggg
tcgtgggtgaaataccagacggagcggaccgaggcaaagcatctgcggtatgcgcagatt
cgctcgctgaaggcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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