KEGG   Rhodococcus opacus B4: ROP_09820
Entry
ROP_09820         CDS       T00882                                 
Symbol
sigL
Name
(GenBank) RNA polymerase ECF-type sigma factor SigL
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rop  Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:rop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rop03021]
    ROP_09820 (sigL)
Transcription machinery [BR:rop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ROP_09820 (sigL)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 HTH_23 GerE Sigma70_ECF Phage_antitermQ HTH_24 PaaA_PaaC HTH_AsnC-type DUF1492
Other DBs
NCBI-ProteinID: BAH49229
NITE: ROP_09820
UniProt: C1AUM1
Position
complement(1025252..1025758)
AA seq 168 aa
MPDAQTELMHALYEEHAPAVWRYALRLTGDRARAEDIVQEVLLRAWKHPNVLDQSESSAR
AWLFTVARNLVFDEHRSARSQREVGMSSTPERAAPDGSDGALDAWMMGDALARLSTDHRA
VLVLGYYRGMSTHQIADELGIPEGTVKSRMHYGLRALRLALQEMGVTR
NT seq 507 nt   +upstreamnt  +downstreamnt
atgccggatgcccagacggagctcatgcacgccctgtacgaggaacatgcccccgcagtc
tggcggtatgccctccggctgaccggcgaccgcgcccgcgccgaggacatcgtgcaggag
gtgctgctgcgcgcctggaagcatccgaacgtgctcgaccagtcggagtcttcggctcgg
gcgtggttgttcacggtcgccaggaacctggtgttcgacgagcaccgcagtgcccggtcc
cagcgtgaggtcgggatgagttcgacacccgaacgggcggccccggacggttcggacggc
gcgctcgacgcctggatgatgggggatgcgctggcccggctcagcacagaccatcgtgcg
gttctcgtgctcggctactaccgggggatgtcgacccaccagatcgccgacgaactcggc
attccggagggaacggtgaaatcccgcatgcattacggattgcgggcccttcgattggct
ctgcaggaaatgggggtgacccgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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