KEGG   Rhodococcus opacus B4: ROP_10560Help
Entry
ROP_10560         CDS       T00882                                 

Gene name
pcaF
Definition
(GenBank) putative beta-ketoadipyl-CoA thiolase
  KO
K00626  acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Organism
rop  Rhodococcus opacus B4
Pathway
rop00071  Fatty acid degradation
rop00072  Synthesis and degradation of ketone bodies
rop00280  Valine, leucine and isoleucine degradation
rop00310  Lysine degradation
rop00362  Benzoate degradation
rop00380  Tryptophan metabolism
rop00620  Pyruvate metabolism
rop00630  Glyoxylate and dicarboxylate metabolism
rop00640  Propanoate metabolism
rop00650  Butanoate metabolism
rop00900  Terpenoid backbone biosynthesis
rop01100  Metabolic pathways
rop01110  Biosynthesis of secondary metabolites
rop01120  Microbial metabolism in diverse environments
rop01130  Biosynthesis of antibiotics
rop01200  Carbon metabolism
rop01212  Fatty acid metabolism
rop02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00620 Pyruvate metabolism
    ROP_10560 (pcaF)
   00630 Glyoxylate and dicarboxylate metabolism
    ROP_10560 (pcaF)
   00640 Propanoate metabolism
    ROP_10560 (pcaF)
   00650 Butanoate metabolism
    ROP_10560 (pcaF)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    ROP_10560 (pcaF)
   00072 Synthesis and degradation of ketone bodies
    ROP_10560 (pcaF)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    ROP_10560 (pcaF)
   00310 Lysine degradation
    ROP_10560 (pcaF)
   00380 Tryptophan metabolism
    ROP_10560 (pcaF)
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    ROP_10560 (pcaF)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    ROP_10560 (pcaF)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ROP_10560 (pcaF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rop04147]
    ROP_10560 (pcaF)
Enzymes [BR:rop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.9  acetyl-CoA C-acetyltransferase
     ROP_10560 (pcaF)
Exosome [BR:rop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   ROP_10560 (pcaF)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Thiolase_N Thiolase_C ketoacyl-synt PsbW
Motif
Other DBs
NCBI-ProteinID: BAH49303
NITE: ROP_10560
UniProt: C1AVM3
Position
1102582..1103793
Genome map
AA seq 403 aa AA seqDB search
MRDVVICEPLRTPVGRFGGVFKDLTPQNLAATVITALVERTGIDGSQIDDVILGQASPGG
EAPAIGRIAALDAGLGIDVPGMQVDRRCGSGLQAVITAVLQVASGGNDLVLAGGAESMSQ
AEFYTNPNIRWGVKGEGVQLADRLARARVTAGGANFPVPGGMIETAENLRAEFDISREDQ
DALAVQSHQRAVAAQESGRFAEEIVGVTVPQRKSDPLVVDRDEHPRADTTVESLSKLRAI
RAKIDSASTVTAGNASGQNDGAAVCIVTTAEKAKELGLKPLARMASWAVAGVPPRTMGIG
PVPATEKALGQLGLSLSDMGVIELNEAFAAQTLAVLRSWDLDPTDERLNPNGSGISLGHP
VGATGGRILATLLREMDRRESRYGLETMCIGGGQGLAAVFERV
NT seq 1212 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgacgtcgtcatctgcgagcccctccggacgccggtcgggcgattcggtggagtg
ttcaaggacctcacaccccagaacctcgccgccaccgtcatcacggcgctcgtcgaacgc
accggcatcgacggtagccagatcgacgacgtcatcctcggtcaggcgtcccccggcgga
gaggccccggccatcggccggatcgccgctctcgacgccggactcggcatcgacgtcccc
ggcatgcaggtggatcgccgctgcggatccggtctacaggctgtcatcaccgccgtgctg
caggtggcgtccggcggcaacgacctcgtgctcgccggcggcgccgaatccatgagccag
gccgagttctacaccaacccgaacatccgctggggtgtcaaaggcgaaggggtgcaactc
gccgaccggctcgcccgcgcccgcgtcaccgccggcggcgcgaacttccccgtgcccggc
ggcatgatcgagaccgccgagaacctgcgcgccgaattcgacatcagccgtgaagaccag
gacgccctcgccgtgcagtcgcaccagcgtgccgtcgccgcacaggaatcgggtcgcttc
gccgaggagatcgtcggagtgacggtgccgcaacgcaagtcggacccgctcgtcgtcgac
agggacgagcacccgcgcgccgacaccacggtggagtcgctgtcgaagctccgcgccatc
cgcgcgaagatcgactccgcctccaccgtcaccgccggcaacgccagcggccagaacgac
ggcgccgccgtgtgcatcgtgacgaccgccgagaaggcgaaggaactgggtctgaagccc
ctcgcccggatggcgtcctgggccgtggccggcgtcccgccgcgcaccatgggcatcggc
ccggtgcccgcgacggagaaggccctcggccagctcggactgtcgctgtccgacatggga
gtcatcgaactgaacgaggccttcgccgcgcagaccctcgccgtcctccgcagctgggac
ctcgaccccaccgacgaacgcctcaaccccaacggatccggcatctccctcgggcaccct
gtcggcgccaccggcggtcgcatcctcgccaccctccttcgggaaatggaccgtcgcgag
tcccgctacgggctcgagaccatgtgcatcggcggcggccagggcctcgccgcggtgttc
gagcgggtctga

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